Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3269 ATGGCACTCAATACGCACAGGGTTTCCTTTTCCTTCTCTATGGTCGGGCCGTCTAGCCTGAGAAGAACCTCTTCTGCTTCCCACTTTGCTAGCCAACCATTTGGCCTTCCCTTTTCTTCCTCATCGCCCGTCAAACTGCCTTCGCAATTTGTTTCCAGGAACTCTAATTGCCGGCCCATCAAATGCTCCGTTTCTGAAGCTACAGAACCCAAGACTGAGAAGAAGAAACAGCAGGAGAGAAGAAGAGACATAAGAAACATAGCAATCGTAGCTCATGTTGATCATGGAAAAACAACTTTAGTTGATGCGATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATTTATACAGGAAAGAATAATGGATTCAAATGATTTGGAGCGTGAAAGAGGAATCACAATACTAAGTAAAAATACATCTGTCACCTTTAAAGACACCAAGATTAATATAATAGATACTCCAGGTCACTCTGACTTCGGAGGTGAAGTGGAGCGCATCCTAAATATGGTGGAAGGAATCCTTTTAGTGGTAGATTCTGTTGAAGGTCCAATGCCACAAACAAGATTTGTTTTAAAGAAGGCCCTAGAGTTTGGGCATGCAGTTGTGGTTGTTGTCAATAAAATTGATAGACCATCTGCTCGGCCGGACTTTGTCATCAATTCTACTTTTGAGCTGTTTCTTGAACTAAATGCGTCGGATGAACAGTGTGACTTCCAAACAATATATGCTAGTGGCATAAAGGGACAAGCAGGACTATCTCCTGAAAATTTGGCAGAAGATCTTGGCCCATTGTTTGAAGCTATAATCAGATGTATCCCTGGACCACATATTGACAAAGATGGTGCACTGCAAATGCTTGCTACAAATATTGAGTACGATGAACATAAAGGGCGTATAGCGATTGGACGATTGCAAGCCGGAGTATTAGAAAGGGGCATGGATGTCAGGGTTTGTACAACTGAAGATTCATGTAGATTTGGGAGAATTAGTGAGCTTTTTGTGTATGACAAATTCAGTAGAGTCCCTGCAGACCGCGTGGAGGCTGGTGATATATGTGCTGTTTGTGGAATTGCTGATATTCAGATTGGGGAAACCATTGCTGACAAAGTATCAGGGAAGCCACTGCCATCCATCAGGGTGGAAGAACCCACTGTGAAAATGTCTTTTTCTATAAACACTTCACCTTTTGTTGGGCGTGAGGGAAAGTATGTCACTAGTAGGAACTTAAGGGATAGGCTCTATCGTGAGCTAGAGCGAAATTTGGCTATGAGAGTTGAAGATGGTGAAACAGCAGATACCTTTATTGTCAGTGGCCGTGGTACTTTGCACATAACCATACTCATAGAAAACATGCGAAGAGAAGGATATGAATTCATGGTAGGTCCTCCCAAGGTTATCAACAAGAAAGCAGGTGATCAATTGCTGGAACCATATGAGATTGCCACTGTGGAGGTACCAGAAGAACACATGGGGGCTGTTGTTGAACTTCTGGGCAAGAGGCGAGGGCAAATGTTCGATATGGAAGGAGTTGGATCGGAAGGAACTACCCTACTGAAATATAGGATTCCAACCCGTGGCCTTTTGGGATTGCGGAATTCTATCTTAACAGCTTCCCGTGGAACAGCAATTCTCAACACTCTCTTTGATAGCTATGGACCTTGGGCAGGGGACATCAGTACTCGGGATCAAGGCTCACTGGTTGCTTTTGAAGATGGAACAAGTACTTCTTATGCGCTTGCTAGTTCACAGGAGAGGGGACAGATGTTTATCCGTCCTGGAGTGGATGTTTACAAAGGTCAAATTGTTGGCATTCATCAGCGACCTGGGGATTTGGCCTTGAATGTTTGCAAGAAAAAAGCCGCAACAAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCGATGGATTATAGTCTGGATGACTGCATCGAATACATCCAAGAAGATGAACTGGTAGAGGTCACTCCCCAAAGCATACGAATGTGCAAGAATCCCAAACTAGCAAAGAAAACAAGGTAG 2031 0.4333 MALNTHRVSFSFSMVGPSSLRRTSSASHFASQPFGLPFSSSSPVKLPSQFVSRNSNCRPIKCSVSEATEPKTEKKKQQERRRDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFIQERIMDSNDLERERGITILSKNTSVTFKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDFVINSTFELFLELNASDEQCDFQTIYASGIKGQAGLSPENLAEDLGPLFEAIIRCIPGPHIDKDGALQMLATNIEYDEHKGRIAIGRLQAGVLERGMDVRVCTTEDSCRFGRISELFVYDKFSRVPADRVEAGDICAVCGIADIQIGETIADKVSGKPLPSIRVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKAGDQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYRIPTRGLLGLRNSILTASRGTAILNTLFDSYGPWAGDISTRDQGSLVAFEDGTSTSYALASSQERGQMFIRPGVDVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVILDTPMDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLAKKTR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3269 676 PRINTS GTP-binding elongation factor signature 130 138 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 PRINTS GTP-binding elongation factor signature 150 160 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 PRINTS GTP-binding elongation factor signature 202 211 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 PRINTS GTP-binding elongation factor signature 86 99 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 NCBIfam translational GTPase TypA/BipA 84 672 IPR006298 GO:0003924|GO:0005525
Prci1g3269 676 NCBIfam small GTP-binding protein domain 84 217 IPR005225 GO:0005525
Prci1g3269 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 285 IPR027417 -
Prci1g3269 676 FunFam GTP-binding protein TypA 385 490 - -
Prci1g3269 676 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 556 668 - -
Prci1g3269 676 MobiDBLite consensus disorder prediction 62 81 - -
Prci1g3269 676 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 123 138 IPR031157 -
Prci1g3269 676 SUPERFAMILY Translation proteins 231 377 IPR009000 -
Prci1g3269 676 Gene3D - 468 561 - -
Prci1g3269 676 FunFam GTP-binding protein TypA 278 378 - -
Prci1g3269 676 CDD BipA_TypA_C 477 556 IPR035651 -
Prci1g3269 676 SUPERFAMILY EF-G C-terminal domain-like 477 592 IPR035647 -
Prci1g3269 676 Gene3D - 81 277 IPR027417 -
Prci1g3269 676 FunFam GTP-binding protein TypA 562 648 - -
Prci1g3269 676 MobiDBLite consensus disorder prediction 67 81 - -
Prci1g3269 676 SMART EFG_C_a 474 563 IPR000640 -
Prci1g3269 676 Pfam Elongation factor G C-terminus 474 560 IPR000640 -
Prci1g3269 676 Gene3D Translation factors 278 378 - -
Prci1g3269 676 Pfam Elongation factor Tu GTP binding domain 83 274 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 CDD TypA_BipA 83 276 IPR047041 -
Prci1g3269 676 Pfam Elongation factor Tu domain 2 298 367 IPR004161 GO:0005525
Prci1g3269 676 CDD BipA_III 384 462 IPR047043 -
Prci1g3269 676 Gene3D Elongation Factor G (Translational Gtpase), domain 3 385 668 - -
Prci1g3269 676 CDD BipA_TypA_II 284 377 IPR047042 -
Prci1g3269 676 FunFam GTP-binding protein TypA 468 561 - -
Prci1g3269 676 Gene3D bipa protein 562 641 IPR042116 -
Prci1g3269 676 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 82 277 IPR000795 GO:0003924|GO:0005525
Prci1g3269 676 SUPERFAMILY EF-G C-terminal domain-like 382 466 IPR035647 -
Prci1g3269 676 FunFam GTP-binding protein TypA 81 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3269 Prci-Chr1 50290450 50298700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3269 82 211 Eukaryotic Initiation Factors Gene Family AT3G22980 43.182 1.16e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3269 K06207 - gmx:100785222 1159.05