Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3263 ATGCTTGAACCAGAGTTATATCGGATTAAATCACCATTCTTGTTGTGCATCTTCATTGGCTTCTTGCTACACTCAGCTTTCACATCTGAAATTCCACTGGGTTCAAAACTTTCTGTGGTTGACAATGAGTGTTGGGTCTCCTCCAATGGTGATTTTGCATTAGGATTCTTTAACATTTCAGATCAACCTAGTCAGTTTAGAATTGGCATTCGTTTCAATTCAAAGTCTATACCATTTAGCCAACAAACTGTGGTCTGGGTGGCTGGAGCTCATGTCACTGTGGGTAGCATGTCCTATTTCCAACTCACCCCAGAAGGAGATCTAGTGCTCTTTGATTCATTACAGGGAGTAGTATGGACCAGTGGAACTGCCAGCCAATCTGTAGTTTCAGCTATTTTTCGTGACAATGGCAATCTTGAGCTCATAAACAGGGAACAGCATGTTGTTTGGCAGAGTTTTGATACTCCATCTGATACACTTGTCCCAGGGCAGAGTTTATCTGTGTACCAAACACTCCGAGCTGCCAGCAAGCAAACCATGTCCAGTTACTACAGCCTTTTATTGAATGGCTCAGGACAGTTACATCTTCGCTGGGAAAGTAATATTACCTATTGGACAAGTGATAGCCCTTCTATTGCAAATCTGAGTGCTTGTCTCACAGCCACTGGAGCCCTGCAACTTCAAGACCAAAGGTCAAAACCAGTTTGGTCAGTGTTTGGTGAAGACCACAATGAATCAGTAAATTATAGGTTTCTTAGGCTTGATTTGGATGGCAATCTGCGGATATATTCATGGATAGAAATGTTGCAATCATGGAGACCAGTTTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTCAACGTGGTATGTGTTTCTTAACCACTTCAGGTTCTGCTGATTGCAGATGCCCGTTTGAGTTAGCTGACCCTAACAAATGTTTGGTACCATACGATGAGGCATGTGAATCAGGCATCAATATGCTTACGTATGAAAAAACATTTCTATATGGAGTTTACCCGCCTGTAGATTCAATTACCATAAGTAGTTTGCAGCATTGCAAACTGTTGTGTTTGAATGACCCACATTGTACAGTTGCAACCTTTTCCAATGATGGAAGTGCTAAATGCTCAATAAAGAAAACTAAGTATGTCACTGGGTTTGCAGATCCTTCTCTAAGCTCAATATCTTTTGTTAAGAGATGTTCAGGTCCATTAGCTGTGAATCCTGGTCTTGTTAATTCACCTCCTCCTAAACCGCCTCCAGCACTTTGTGTTCCTTGTTTGATAGGAGCAGCCTCAGCCACTTTTCTCTTCTTTGCCGTCATACAGTTGGGAATTGGTTTCTTCATCTGCAGAAGGAGAAAAATAACGAGGAAGGAAGTTACTTTAGCTTTAACATGCCCCAACTCAAAGGGTTTGTTTGTGTTGTCCTTCCCAGAGATAAAGAGCCTCACTGGGGATTTCAAGAACCAAATCGGTCCAAATATGTTCAAAGGTACACTACAGAACAATCACTTGGTTGCAGTTAAGAATCTTAATGCAAGCATAGAAGAAAGGAGGTTCAGGAGCACTGTCATGAAGATTGGGAGCATTCATCACAAAAACCTTGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATCACAGATTCTTGGTGTACGAGTATGTCAAGAACGGTTCTTTGGATAAGTTCTTAGGTGAATCGTCTCTTTGCCGGAGGCTAACTTGGAGAAAGAGAATTGAGATATGCTCAAGTGTAGCAAAATCCATTTGCTATTTGCACACCGAGTGTCGGGAGTTTGTTAGCCATGGCAATCTGAAGTGTGCAAATATCTTACTGGACGAAAACTTAGAGGCCAAGTTAACTGAATTTGGGTTTGCAAGAGTAAATGGTGAGACCCCATATTGTGGCTCTTCAGCTGAGAAAGATGTGGAGGATTTTGGCAAGTTGGCACTAACTTTGTTATCTGGGCGTCAAGACACCGAGGATCTTTGCCAGTGGGCATATGAACAGTGGATGGAAGGACGACCCCACAATGTGGTTGACAAAAGAGTTGATAGTGGAATCGATTCAGAGGAGCTAGAACGTGCGTTAAGAATAATATTCTGGTGTCTTCAAGTGGATGAACGTAGGAGGCCTTCAATGGGGGAGGTAGCAAGAGTGCTAGATGGTATATTGAATGTTGATCTCCCACCACGCCCTTTCGCTGTCCAAAGGCCTCTGCTAGAAGATGATGATGATACTCAAGAGTATGATTCAGAGTCACTAGTGTAG 2286 0.4265 MLEPELYRIKSPFLLCIFIGFLLHSAFTSEIPLGSKLSVVDNECWVSSNGDFALGFFNISDQPSQFRIGIRFNSKSIPFSQQTVVWVAGAHVTVGSMSYFQLTPEGDLVLFDSLQGVVWTSGTASQSVVSAIFRDNGNLELINREQHVVWQSFDTPSDTLVPGQSLSVYQTLRAASKQTMSSYYSLLLNGSGQLHLRWESNITYWTSDSPSIANLSACLTATGALQLQDQRSKPVWSVFGEDHNESVNYRFLRLDLDGNLRIYSWIEMLQSWRPVWQAVENQCKVFATCGQRGMCFLTTSGSADCRCPFELADPNKCLVPYDEACESGINMLTYEKTFLYGVYPPVDSITISSLQHCKLLCLNDPHCTVATFSNDGSAKCSIKKTKYVTGFADPSLSSISFVKRCSGPLAVNPGLVNSPPPKPPPALCVPCLIGAASATFLFFAVIQLGIGFFICRRRKITRKEVTLALTCPNSKGLFVLSFPEIKSLTGDFKNQIGPNMFKGTLQNNHLVAVKNLNASIEERRFRSTVMKIGSIHHKNLVKLEGYCCEFNHRFLVYEYVKNGSLDKFLGESSLCRRLTWRKRIEICSSVAKSICYLHTECREFVSHGNLKCANILLDENLEAKLTEFGFARVNGETPYCGSSAEKDVEDFGKLALTLLSGRQDTEDLCQWAYEQWMEGRPHNVVDKRVDSGIDSEELERALRIIFWCLQVDERRRPSMGEVARVLDGILNVDLPPRPFAVQRPLLEDDDDTQEYDSESLV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3263 761 Pfam S-locus glycoprotein domain 244 307 IPR000858 GO:0048544
Prci1g3263 761 Gene3D Hepatocyte Growth Factor 334 407 - -
Prci1g3263 761 Pfam Protein tyrosine and serine/threonine kinase 505 640 IPR001245 GO:0004672|GO:0006468
Prci1g3263 761 SMART blect_4 36 156 IPR001480 -
Prci1g3263 761 PANTHER OS07G0415500 PROTEIN 13 739 - -
Prci1g3263 761 Gene3D - 25 154 IPR036426 -
Prci1g3263 761 Gene3D - 155 279 IPR036426 -
Prci1g3263 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 168 IPR036426 -
Prci1g3263 761 SMART ntp_6 326 404 IPR003609 -
Prci1g3263 761 PIRSF SRK 4 639 IPR024171 GO:0004674
Prci1g3263 761 PIRSF SRK 642 760 IPR024171 GO:0004674
Prci1g3263 761 ProSiteProfiles Bulb-type lectin domain profile. 157 275 IPR001480 -
Prci1g3263 761 ProSiteProfiles Protein kinase domain profile. 442 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3263 761 CDD B_lectin 46 156 IPR001480 -
Prci1g3263 761 Gene3D Phosphorylase Kinase; domain 1 455 559 - -
Prci1g3263 761 Pfam D-mannose binding lectin 83 171 IPR001480 -
Prci1g3263 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 156 274 - -
Prci1g3263 761 ProSiteProfiles PAN/Apple domain profile. 325 405 IPR003609 -
Prci1g3263 761 Gene3D Transferase(Phosphotransferase) domain 1 643 734 - -
Prci1g3263 761 Gene3D Transferase(Phosphotransferase) domain 1 560 642 - -
Prci1g3263 761 SUPERFAMILY Protein kinase-like (PK-like) 500 726 IPR011009 -
Prci1g3263 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 639 734 - -
Prci1g3263 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 456 559 - -
Prci1g3263 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 560 638 - -
Prci1g3263 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 155 - -
Prci1g3263 761 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Prci1g3263 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 175 272 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3263 Prci-Chr1 50263265 50267001 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3263 413 733 Receptor kinase-like Gene Family AT1G56120 33.056 1.91e-39 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci1g3263 PK_Tyr_Ser-Thr 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3263 - - gmx:100809478 1096.65