Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3241 ATGGCGAAGAAGAAGAAGGCTAGGGTTTCTGATGACGAAAGTCTTGGATCCGAGCAGGAAGCGGAGAAACAGAATCAGAACCCAAGTTCCTCTACGGAAAAGAGCCTCTACGAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAAGCATACTACAAGTTAGCATTGCGGCTCCATCCTGATAAAAACCCCGGTGATGAGGAAGCTAAGGAGAGATTTCAGCAATTGCAAAAAGTGATCTCAATTCTTGGTGATGAAGATAAACGGGCTCTTTATGATCAGACCGGTTGTGTTGATGATGCTGACCTTGCTGGGGAAGTTGTTCAGAATCTTCACGAGTATTTCAGAGCAGTGTACAGGAAGGTCACTGAAGCTGATATTGAGGAATTTGAAGCAAACTATAGGGGATCAGACTCTGAGAAAAATGATTTAATTGACCTGTACAAAAAGTACAAGGGTAATATGAACAGGCTCTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACATCGTTTCAAAGATATCATTGATGAGGTTATAGCTGCTGGTGAACTGAAGTCAACTAAAGCCTACCAGAAATGGGCGAAGAAAGTTGATGAAATGAAGCCACCAACCAGTCCTTTAAGGAGAGCAAAGTCAAATAAACAGGCCGGAACAGATCTATATGCAGTCATTTTGCAACGCCGAAATGAGAGGAAAGGCCAGTTTGATTCAATGTTCACATCATTAATTTCTAAATATGGAGGGGGTGATGCTGCAGAGCCCAGTGAAGAAGAGTTTGAAGCTACACAGAGAAAACTTGAAAGCCGAAGGCTGTCAAAAAAATCAAAACGCAAGTAA 858 0.4207 MAKKKKARVSDDESLGSEQEAEKQNQNPSSSTEKSLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKERFQQLQKVISILGDEDKRALYDQTGCVDDADLAGEVVQNLHEYFRAVYRKVTEADIEEFEANYRGSDSEKNDLIDLYKKYKGNMNRLFCSMLCSDPKLDSHRFKDIIDEVIAAGELKSTKAYQKWAKKVDEMKPPTSPLRRAKSNKQAGTDLYAVILQRRNERKGQFDSMFTSLISKYGGGDAAEPSEEEFEATQRKLESRRLSKKSKRK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3241 285 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Prci1g3241 285 MobiDBLite consensus disorder prediction 254 285 - -
Prci1g3241 285 MobiDBLite consensus disorder prediction 1 36 - -
Prci1g3241 285 SMART dnaj_3 34 92 IPR001623 -
Prci1g3241 285 Pfam DnaJ domain 36 97 IPR001623 -
Prci1g3241 285 CDD DnaJ 37 89 IPR001623 -
Prci1g3241 285 PRINTS DnaJ domain signature 72 92 IPR001623 -
Prci1g3241 285 PRINTS DnaJ domain signature 37 55 IPR001623 -
Prci1g3241 285 PRINTS DnaJ domain signature 92 111 IPR001623 -
Prci1g3241 285 PRINTS DnaJ domain signature 55 70 IPR001623 -
Prci1g3241 285 MobiDBLite consensus disorder prediction 20 36 - -
Prci1g3241 285 SUPERFAMILY Chaperone J-domain 32 115 IPR036869 -
Prci1g3241 285 Gene3D DnaJ domain 17 112 IPR036869 -
Prci1g3241 285 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 285 IPR042977 -
Prci1g3241 285 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3241 Prci-Chr1 50093436 50096743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3241 29 97 C2H2 Transcription Factor Family AT1G74250 39.189 1.69e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3241 K09529 - qsa:O6P43_006547 460.299