Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3223 ATGGATGATTTTAGTGCGGTTCTTATGTTCATCTTGCTAGCCCTATTCTTCATCTTGTTGGGACAATCCATGTATAGAAAGTCTCAAGGCAAAGCCAAGCTGCCACCAAGCCCACCGGGCCTACCGATCATAGGCCACTTCCACCTTCTTGGCCCTCTCCCTCACCGAGCTTTCCACGACATCTCACAACGTCATGGCCCTCTCCTTCACCTTTCCTTCGGCTCCAAATCTTGCGTCCTCGTTTCCTCTCCTGAGATCGCCAGGGAATGCCTCAAAACCAATGACGCTTCGTTCTTGAACCACCCTCGTAAAACCAACCTCGCCTATGTCACGTATGACGGTGCTGATATTTTCATGGCACCTTACGGACCTTTTTGGAAGTTCATGAGAAAGCTTTTCATTACTCGGCTCCTCAGCCCCACCACGCTGCACCATCACTCTCCTGTCCGAGCGCAAGAGCTCAATTTCTTCTTGCACTGTTTGCTGAAAAAGGCTGATTTAGGAGAGGAAGTTAACGTTGGAGAGGAGGTGGCGTTGTTGGCGTATAATATTGTCACCACAATGGCTTTCAGAAAAAGGTGCGCCGATGTTAAGAGTGAAGGGTCCCAGCTGATTCAGGTGGTCAAAGAGTTGGTCGAGCTTGGTGGTAAGTTCAACTTAGCAGACATGGGGTGGTTGTTTAAGAAGCTAGACTTGCAGGGGTACAGGAAACTACTAAAAAGTGTTCGAAGTAAGTACGACGTTATAATAGAGAGAATCATCAAGGAGCATGAAGAGTCAAGAAGGAAGAAGAAGGACATGCAGAAGGATGACGAAGCAGAAGCAGAGGGGGACCTGCTTGATATTCTATTAGACATATACGAGGATCCAAATTCAGAGATTAGATTGACCAGAGAAAACATCAAGGCCTTCTTTCTGAACATCTTTGGAGCTGGCACTGACACTTCATCGCTTACAGTGACATGGGCCCTGGCAGAGCTGATGAATCACCCAGATATAATGAAGAAAGCAAAGAAAGAGATCGATTCAGTGGTAGGGAAGGGCAGACTAGTGGAGGAATCAGATATTCCAAACCTTCCGTACGTGGAATCCATTGTGAAAGAAACATTCAGACTTCACCCAACAGGAACCATAATATCGAGACAAGCAACGCAAGAGTGTAAAGTTAATGGGTACGTGATTCCGGCGAAGACGTCTCTGATCGTGAACGTGTGGTCGATTGGAAGGGACCCTGAGTACTGGGAATACCCACTAGAGTTCAGACCAGAGAGGTTTATGACTGACGAGGGACGGAGCGAGATGAGCCTGAAGGCGCAGAATTTCGAGCTGTTGGTGTTTGGGGCGGGAAGAAGAATGTGTCCAGGTGTCTCACTGGCAACGAAGGTGGTGCCAACAGCTCTGGCTGCTATGATACAGTGTTTCGAGTGGAAGCTGGCTCATGAAGGAGAGGTTGACATGGAGGAGAAACCTGGTTTAGGCCTCCCTAGAGCTAATCCTTTGCTGTGCATTGCTGTGCCTAGGTCCCTGCCCTTTCTAAAACTCTAG 1545 0.4822 MDDFSAVLMFILLALFFILLGQSMYRKSQGKAKLPPSPPGLPIIGHFHLLGPLPHRAFHDISQRHGPLLHLSFGSKSCVLVSSPEIARECLKTNDASFLNHPRKTNLAYVTYDGADIFMAPYGPFWKFMRKLFITRLLSPTTLHHHSPVRAQELNFFLHCLLKKADLGEEVNVGEEVALLAYNIVTTMAFRKRCADVKSEGSQLIQVVKELVELGGKFNLADMGWLFKKLDLQGYRKLLKSVRSKYDVIIERIIKEHEESRRKKKDMQKDDEAEAEGDLLDILLDIYEDPNSEIRLTRENIKAFFLNIFGAGTDTSSLTVTWALAELMNHPDIMKKAKKEIDSVVGKGRLVEESDIPNLPYVESIVKETFRLHPTGTIISRQATQECKVNGYVIPAKTSLIVNVWSIGRDPEYWEYPLEFRPERFMTDEGRSEMSLKAQNFELLVFGAGRRMCPGVSLATKVVPTALAAMIQCFEWKLAHEGEVDMEEKPGLGLPRANPLLCIAVPRSLPFLKL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3223 514 Coils Coil 250 270 - -
Prci1g3223 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PANTHER CYTOCHROME P450 98A9 6 510 - -
Prci1g3223 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Prci1g3223 514 CDD CYP93 66 503 - -
Prci1g3223 514 Gene3D Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 SUPERFAMILY Cytochrome P450 35 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 Pfam Cytochrome P450 35 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g3223 514 FunFam Cytochrome P450 family protein 26 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3223 Prci-Chr1 50000655 50002623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3223 1 507 Cytochrome P450 AT5G06900 50.491 1.34e-179 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3223 K24188 - gmx:100807524 621.698