Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3215 ATGGCGGGAATTGGTCTATGCTCCGGTCTTTCTTCCTCCAGCAACTTAGGTACATCTTGGTTGGTATTAAAATCTCACAATGCAAGGACCATGCTAGGGAAACATCCTGGAAGGCGAAGCTTGGCAATAAAAGCTGCAGTGAAATATGTAAATGCTGAAGAAGCAAAAGAACTTATTGCAGTCGAAGGATACACAGTTCTGGATGTCAGGGATAAAAGCCAGTTTGACCGAGCTCACATAAAATCATGCTATCACGTGCCTCTTTTTGTTGAAAATCAAGACAATGATCTTGGCACAATTATAAAAAGGACCCTGCACAATAACTTTGCTGGGTTGTTCTTTGGGTTGCCATTCACTAAATTAAACCCTCATTTTGTGCAATCTGTCAAGAGCCAGCTTTCCCCTGAAAGTAAACTCTTGGTTGTATGCCAGGAAGGATTGAGATCTGCTGCGGCAGCAAATAAATTAGAGCAATCTGGTTTCTCAAATATGGCATGCATTACATCAGGCCTTCAAACTGTGAAACCAGGAACATTTGATTCTGTTGGTTCCACAGAGTTGCAGAATGCTGGAAAAGCTGGGTTGGTGACAATCCAAGGGAAAATCTCAGCTGTTTTGGGAACTGTTCTTGTTTGTGCATATTTGTTCATTACCTTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAGCTGGCCCCTGGAAGCTAG 705 0.4284 MAGIGLCSGLSSSSNLGTSWLVLKSHNARTMLGKHPGRRSLAIKAAVKYVNAEEAKELIAVEGYTVLDVRDKSQFDRAHIKSCYHVPLFVENQDNDLGTIIKRTLHNNFAGLFFGLPFTKLNPHFVQSVKSQLSPESKLLVVCQEGLRSAAAANKLEQSGFSNMACITSGLQTVKPGTFDSVGSTELQNAGKAGLVTIQGKISAVLGTVLVCAYLFITFFPEQAEKLFQLAPGS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3215 234 Gene3D - 47 178 IPR036873 -
Prci1g3215 234 CDD RHOD 54 175 - -
Prci1g3215 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 172 IPR036873 -
Prci1g3215 234 Pfam Rhodanese-like domain 52 172 IPR001763 -
Prci1g3215 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 232 IPR044615 -
Prci1g3215 234 SMART rhod_4 50 180 IPR001763 -
Prci1g3215 234 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 37 179 - -
Prci1g3215 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3215 Prci-Chr1 49940694 49943447 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3215 1 228 Sulfurtransferasese or Rhodanese AT2G42220 69.565 1.92e-116 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3215 - - adu:107492903 378.252