Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3214 ATGACTGAATTTAGTGAGCAGAAGACGAGATACATAGACTACCAAGAAATCTTACAATGGCGGGAATTGGTCTATGCTCCGGTCTTTCTTCCTCCAGGGAAACATCCTGGAAGGCGAAGCTTGGCAATAAAAGCTGCAGTGAAATATGTAAATGCTGAAGAAGCAAAAGAACTTATTGCAGTCGAAGGATACACAGTTCTGGATGTCAGGGATAAAAGCCAGTTTGACCGAGCTCACATAAAATCATGCTATCACGTGCCTCTTTTTGTTGAAAATCAAGACAATGATCTTGGCACAATTATAAAAAGGACCCTGCACAATAACTTTGCTGGGTTGTTCTTTGGGTTGCCATTCACTAAATTAAACCCTCATTTTGTGCAATCTGTCAAGAGCCAGCTTTCCCCTGAAAGTAAACTCTTGGTTGTATGCCAGGAAGGATTGAGATCTGCTGCGGCAGCAAATAAATTAGAGCAATCTGGTTTCTCAAATATGGCATGCATTACATCAGGCCTTCAAACTGTGAAACCAGGAACATTTGATTCTGTTGGTTCCACAGAGTTGCAGAATGCTGGAAAAGCTGGGTTGGTGACAATCCAAGGGAAAATCTCAGCTGTTTTGGGAACTGTTCTTGTTTGTGCATATTTGTTCATTACCTTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAGCTGGCCCCTGGAAGCTAG 705 0.4255 MTEFSEQKTRYIDYQEILQWRELVYAPVFLPPGKHPGRRSLAIKAAVKYVNAEEAKELIAVEGYTVLDVRDKSQFDRAHIKSCYHVPLFVENQDNDLGTIIKRTLHNNFAGLFFGLPFTKLNPHFVQSVKSQLSPESKLLVVCQEGLRSAAAANKLEQSGFSNMACITSGLQTVKPGTFDSVGSTELQNAGKAGLVTIQGKISAVLGTVLVCAYLFITFFPEQAEKLFQLAPGS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3214 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 33 232 IPR044615 -
Prci1g3214 234 CDD RHOD 54 175 - -
Prci1g3214 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 172 IPR036873 -
Prci1g3214 234 Pfam Rhodanese-like domain 52 172 IPR001763 -
Prci1g3214 234 SMART rhod_4 50 180 IPR001763 -
Prci1g3214 234 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 37 179 - -
Prci1g3214 234 Gene3D - 47 178 IPR036873 -
Prci1g3214 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3214 Prci-Chr1 49940679 49943447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3214 38 228 Sulfurtransferasese or Rhodanese AT2G42220 77.487 1.11e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3214 - - vvi:100241760 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3214 1 49940679 49943447 Prci1g3214 1 49940679 49943447 ECH