Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3206 ATGATCGAGAAAATGGCTTGCGAGTGCCACTATATGCATCTGATTATCATTGTCTTCTCCGCAATGTTGATTTCCCAGGGTCTCGCATCCACTGATCCGGCTGACGTCACAGCTCTCCGGGATCTATACAAGACATTGAACTATCCGCCGGTGTTGGAAAAATGGAATCTTGAAGATCCTTGTGAGGAGTCTTGGACAGGAGTTGCATGTTCAGGATCGTCAGTCGTGCACCTCAAAATTCAAGGATTGAATCTCACAGGACATCTTGGAAGCCAGCTCCATCATCTACATAATTTGAAGATGCTTGATGTCAGCTCCAATAACATAGAAGGGGAAATACCATTCATCTTACCCCCGAATGCCACCCATATAAACATGGCTTGCAACTATTTGGGCCAAAATATTCCTCACTCATTGACTATGCTGAAAAGACTACGACATTTGAATCTAAGCCACAATTTGTTATCTGGACCCATCGGCAATGTTTTTACAGGCCTAGATAATCTCAGAGAGATGGACCTTTCGTATAACAATTTCACAGGAGATCTACCCAGTTCATTTGGTTCCTTGAAAAACCTTACTAGATTGTTCTTGCAAAATAACAACTTCACTGGATCGGTCACATATCTGGCTGACCTTCCTCTTACAGACTTGAACATTCAAGGTAATCTATTCAGCGGCATTATTCCGCAGCACTTTCAGTACATACCAAATTTATGGATCGGAAGTAATAAGTTCCGTGCAGACGCCAATTCTCCTCCCTGGGTTTTTCCTTTGGATAGGGCACCAGTTGAGTACAACATTAGTCGCCCGCCCACGAATCAGGCAAATGCCATCGAGAACTATTCCTCTCGCAAAAGCAAAGTAAGTGGGCACAAGAAGAAATTTATGACTGCTGGAGGAGTAGCTTTAATGGTTGGTGGGGTGGCGCTAATAGCTACAGGTGTAGCGCTGTTCATTGCAATCCGCTTACAGAGGTTCAAAAGCTTAGAAAGCAGCCATAGCTCATTGAAAGCTCATCCAACTATTGCAACCATAGAAGTCTCTCCTACCACGCCAGAAGAAAGCCCACGAATCCCGCCATTTAATTCTGCATCACTTTTGGGTCCAAGGCGATTACCTCCCTTGCCCCATCACAGAACAGATGCCACGTCAAGAAGAAGTTTTTCCAAGAGATGCAGATTCTCCGGAAGGACAAAAGTTTACTCAGTGGGAGAGCTTCAGTTAGCCACAGACAGCTTCAGTGAAGACAACTTTTTGGGAGAGGGATCTTTGGGTCCTGTTTACAGAGCCGTGTTTCCAAATGGCCAAACTTTGGCTTTGAAGAATATCAACATGGCGGGCCTGTCTTTCCACGAAGAGGAAAAGTTTTTGGATGTCGTTTCCACCGCTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAATGGTTATTGTATGGAGCACGGGCAGCATCTTCTTGTTTACGATTATGTTAGAAGCTTAACTCTGGACGATGCTCTCCACATGAAGGCCTACAAGCCTTTATCGTGGGCCCTCCGTCTCCGGATTGCCCTTGGTGTTGCCCAGGCTTTGGACTATTTGCACTCGACGTTCTCCCCTCCTGTAGTCCACGGCAACTTGAAGGCTGCCAATATCCTTCTCGACGAGAATCTGGCGCCTTGTGTCTCTGACTGTGGCCTAGCTACTTTGAGACCGCTGACGAACAACAAAGTCAGAGGTTCTGAACTTGCAACTGAGGACGCAGGCTGCATTGCACCAGACCATGGCCAACCAGGAGTTAGCAACACGAAGAGTGATGTCTATGCGTTTGGGGTGTTGCTTCTGGAATTATTAACGGGAAAGAAACCTTACGACGATTCGAGGCCAAGGGAGGGACAATATCTGGGGAAATGGGCATCATCGAGGCTTCATGACAGTGAGAGTTTGGAACAGATGGTGGATCCCGGAATTAAAGGGACTGTTTCAACCAAAGCTCTTTCTCATTATGCCGATATCATCACCCTCTGCATACAGCCCGCGAAGGAATTCCGACCTCTGATGTCCGAGGTGGTTGACTCTCTTATAACCTGTTCGCGAAAGATTAACATGGGCACATCCAAGACTGGTGGTGCAGAAGCTGATATCACTGACTTGGATCCAATTGACAAGTCTTTCCGTTCAACCAATACTCGCTTTCTGGGTTCCCCCGCATATAGCTACGTATCCGCCTGA 2214 0.4675 MIEKMACECHYMHLIIIVFSAMLISQGLASTDPADVTALRDLYKTLNYPPVLEKWNLEDPCEESWTGVACSGSSVVHLKIQGLNLTGHLGSQLHHLHNLKMLDVSSNNIEGEIPFILPPNATHINMACNYLGQNIPHSLTMLKRLRHLNLSHNLLSGPIGNVFTGLDNLREMDLSYNNFTGDLPSSFGSLKNLTRLFLQNNNFTGSVTYLADLPLTDLNIQGNLFSGIIPQHFQYIPNLWIGSNKFRADANSPPWVFPLDRAPVEYNISRPPTNQANAIENYSSRKSKVSGHKKKFMTAGGVALMVGGVALIATGVALFIAIRLQRFKSLESSHSSLKAHPTIATIEVSPTTPEESPRIPPFNSASLLGPRRLPPLPHHRTDATSRRSFSKRCRFSGRTKVYSVGELQLATDSFSEDNFLGEGSLGPVYRAVFPNGQTLALKNINMAGLSFHEEEKFLDVVSTASRLRHPNIVALNGYCMEHGQHLLVYDYVRSLTLDDALHMKAYKPLSWALRLRIALGVAQALDYLHSTFSPPVVHGNLKAANILLDENLAPCVSDCGLATLRPLTNNKVRGSELATEDAGCIAPDHGQPGVSNTKSDVYAFGVLLLELLTGKKPYDDSRPREGQYLGKWASSRLHDSESLEQMVDPGIKGTVSTKALSHYADIITLCIQPAKEFRPLMSEVVDSLITCSRKINMGTSKTGGAEADITDLDPIDKSFRSTNTRFLGSPAYSYVSA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3206 737 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 32 257 - -
Prci1g3206 737 SUPERFAMILY L domain-like 31 240 - -
Prci1g3206 737 SMART LRR_typ_2 142 165 IPR003591 -
Prci1g3206 737 SMART LRR_typ_2 166 189 IPR003591 -
Prci1g3206 737 SMART LRR_typ_2 96 123 IPR003591 -
Prci1g3206 737 SMART LRR_typ_2 190 213 IPR003591 -
Prci1g3206 737 Pfam Leucine rich repeat 162 203 IPR001611 GO:0005515
Prci1g3206 737 Gene3D Transferase(Phosphotransferase) domain 1 494 708 - -
Prci1g3206 737 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3206 737 Pfam Protein tyrosine and serine/threonine kinase 418 688 IPR001245 GO:0004672|GO:0006468
Prci1g3206 737 Gene3D Phosphorylase Kinase; domain 1 378 491 - -
Prci1g3206 737 Gene3D Ribonuclease Inhibitor 32 260 IPR032675 -
Prci1g3206 737 MobiDBLite consensus disorder prediction 349 389 - -
Prci1g3206 737 MobiDBLite consensus disorder prediction 375 389 - -
Prci1g3206 737 SUPERFAMILY Protein kinase-like (PK-like) 388 688 IPR011009 -
Prci1g3206 737 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Prci1g3206 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 690 IPR046959 -
Prci1g3206 737 FunFam Leucine-rich repeat receptor-like protein kinase 492 699 - -
Prci1g3206 737 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3206 Prci-Chr1 49900554 49906010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3206 5 737 Strubbelig Receptor Gene Family AT5G06820 54.852 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci1g3206 PK_Tyr_Ser-Thr 1.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3206 - - tpra:123896060 971.844