Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3139 ATGATTCGTATGTGTCCAGATACTAACTACTTGTTTATGGGAGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTTCTTGTGGCACTAAAAGTGAGGTATCCCCAGCGGATAACTATTCTTCGTGGGAACCATGAAAGTCGCCAGATCACTCAAGTATATGGATTTTATGATGAATGCCTAAGGAAGTATGGTAATGCTAATGTTTGGAAGATCTTCACAGACCTTTTTGATTACTTTCCATTGACTGCATTGGTTGAGTCAGAGATATTTTGTCTGCATGGTGGACTATCTCCTTCCATTGAGACTCTTGATAATGTGAGGAACTTCGATCGTGTTCAGGAGGTTCCTCATGAAGGGCCCATGTGTGATCTATTATGGTCCGACCCAGATGACAGATGTGGTTGGGGAATTTCTCCTCGCGGTGCAGGATATACTTTTGGCCAGGACATATCTGAGCAATTCAATCACACAAACAACCTTAAGTTGATCGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCACGAACAAAAGGTGGTTACCATCTTTAGTGCCCCTAATTACTGTTATCGATGCGGGAACATGGCTTCCATTTTGGAAGTTGATGATTGCAAGGACCACACTTTCATCCAGTTTGAACCTGCTCCTAGGAGGGGAGAGCCAGATGTTACCCGTAGAACACCTGATTACTTCCTTTAA 720 0.4306 MIRMCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNVRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKDHTFIQFEPAPRRGEPDVTRRTPDYFL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3139 239 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 4 239 IPR047129 GO:0004722
Prci1g3139 239 SUPERFAMILY Metallo-dependent phosphatases 3 224 IPR029052 -
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 78 104 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 185 201 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 1 9 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 43 67 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 107 134 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 163 183 IPR006186 GO:0016787
Prci1g3139 239 PRINTS Serine/threonine phosphatase family signature 10 37 IPR006186 GO:0016787
Prci1g3139 239 SMART pp2a_7 1 223 IPR006186 GO:0016787
Prci1g3139 239 Pfam Calcineurin-like phosphoesterase 8 172 IPR004843 GO:0016787
Prci1g3139 239 Gene3D - 1 239 IPR029052 -
Prci1g3139 239 ProSitePatterns Serine/threonine specific protein phosphatases signature. 44 49 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3139 Prci-Chr1 49431900 49437111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3139 5 169 Calmodulin-binding Proteins AT5G63870 33.831 4.15e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3139 K04382 - cpap:110811707 501.901