Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3135 ATGTCACGGTCACTGTGTAAGCATTGGAGCAGGTTGGTTACGCCATTCAGAATAGCAAATTGTGGCGAGAGACTTCAACTCACGGCATTCTCCTCTTCCACAACCTCAGCGGAGCATGACAGTCCCAGTCGACCCGGTCCGCCTCCGATTCGGGTGGGCTTCACCGAATCAGCTGGGCGTGGTGTATTTGCCACTCGAGCCATCGGAGCCGGAGATCTCATCCACACCTCCAAACCCTTTCTGTGCCACCCTTCTCCCTCATGTATCCACGCTGTTTGTTACTTTTGCCTCAGAGAGCTTCGAAATTCGACCAACCCGGTAGATGCGGGCGCATCATTTTGTAGTGAAGAATGCAAAGAATGTTCTAAGGAGTTTTATGATGTTGAAATGAAAGCGAATTGGATGGCTTTTGATGCTTATTGCCAGACCCATGGTTTGAAATATCCATTTCTGGTAAAACGTTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATTGACAGTCTTGACATACTTCAACCTGCCAGCTTGACACCTGAGATGATACTAGAGTTGGAAGAGGGTTTTGCCTTGTTAAGGAATGCCTTGACGAAGACACTTATTGCGTATGAAGATATTGCTTTTTTAAGCAAGCAATGGTACATTAGTGTTCTGGCACGAATTCGTATCAATGCATTTCGAGTTGAACTGGCTAGAGGCTTGTATGAAGATCTGCTATCATCTGCAGTTGCATCTGTAGAAGCCGAAGCTTCTGTTGGAAATGCTGTCTACATACTTCCATCTTTCTACAATCATGACTGTGATCCTAATGCACATATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCCGTAACATTGAGGAAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCATGGACCGTGATGCTCGACAAGAACTTCTGCTTGGAGGATTTGGTTTTCAATGCAATTGCAATAGATGCTCACAAGGCGACTAG 993 0.4542 MSRSLCKHWSRLVTPFRIANCGERLQLTAFSSSTTSAEHDSPSRPGPPPIRVGFTESAGRGVFATRAIGAGDLIHTSKPFLCHPSPSCIHAVCYFCLRELRNSTNPVDAGASFCSEECKECSKEFYDVEMKANWMAFDAYCQTHGLKYPFLVKRLACMIISGVASIDSLDILQPASLTPEMILELEEGFALLRNALTKTLIAYEDIAFLSKQWYISVLARIRINAFRVELARGLYEDLLSSAVASVEAEASVGNAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRNIEEGEELRICYIDASMDRDARQELLLGGFGFQCNCNRCSQGD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3135 330 SMART set_7 48 306 IPR001214 GO:0005515
Prci1g3135 330 SUPERFAMILY SET domain 48 324 IPR046341 -
Prci1g3135 330 ProSiteProfiles SET domain profile. 48 300 IPR001214 GO:0005515
Prci1g3135 330 CDD SET_SMYD 239 326 - -
Prci1g3135 330 Gene3D - 144 225 - -
Prci1g3135 330 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 328 - -
Prci1g3135 330 Pfam SET domain 59 299 IPR001214 GO:0005515
Prci1g3135 330 Gene3D SET domain 61 326 IPR046341 -
Prci1g3135 330 Gene3D - 92 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3135 Prci-Chr1 49416526 49420067 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g3135 SET 2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3135 - - pcin:129308775 630.172