Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3134 ATGTCACGGTCACTGTGTAAGCATTGGAGCAGGTTGGTTACGCCATTCAGAATAGCAAATTGTGGCGAGAGACTTCAACTCACGGCATTCTCCTCTTCCACAACCTCAGCGGAGCATGACAGTCCCAGTCGACCCGGTCCGCCTCCGATTCGGGTGGGCTTCACCGAATCAGCTGGGCGTGGTGTATTTGCCACTCGAGCCATCGGAGCCGGAGATCTCATCCACACCTCCAAACCCTTTCTGTGCCACCCTTCTCCCTCATGTATCCACGCTGTTTGTTACTTTTGCCTCAGAGAGCTTCGAAATTCGACCAACCCGGTAGATGCGGGCGCATCATTTTGTAGTGAAGAATGCAAAGAATGTTCTAAGGAGTTTTATGATGTTGAAATGAAAGCGAATTGGATGGCTTTTGATGCTTATTGCCAGACCCATGGTTTGAAATATCCATTTCTGGTAAAACGTTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATTGACAGTCTTGACATACTTCAACCTGCCAGCTTGACACCTGAGATGATACTAGAGTTGGAAGAGGGTTTTGCCTTGTTAAGGAATGCCTTGACGAAGACACTTATTGCGTATGAAGATATTGCTTTTTTAAGCAAGCAATGGTACATTAGTGTTCTGGCACGAATTCGTATCAATGCATTTCGAGTTGAACTGGCTAGAGGCTTGTATGAAGATCTGCTATCATCTGCAGTTGCATCTGTAGAAGCCGAAGCTTCTGTTGGAAATGCTGTCTACATACTTCCATCTTTCTACAATCATGACTGTGATCCTAATGCACATATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCCGTAACATTGAGGAAGGACCATTTGGCTTTCGTGAGATCAATGGCTATATGATGAAGTTTTTTTTCTTTTGTTTTTTTGGGCACATCTCAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCATGGACCGTGATGCTCGACAAGAACTTCTGCTTGGAGGATTTGGTTTTCAATGCAATTGCAATAGATGCTCACAAGGCGACTAG 1068 0.4476 MSRSLCKHWSRLVTPFRIANCGERLQLTAFSSSTTSAEHDSPSRPGPPPIRVGFTESAGRGVFATRAIGAGDLIHTSKPFLCHPSPSCIHAVCYFCLRELRNSTNPVDAGASFCSEECKECSKEFYDVEMKANWMAFDAYCQTHGLKYPFLVKRLACMIISGVASIDSLDILQPASLTPEMILELEEGFALLRNALTKTLIAYEDIAFLSKQWYISVLARIRINAFRVELARGLYEDLLSSAVASVEAEASVGNAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRNIEEGPFGFREINGYMMKFFFFCFFGHISGEELRICYIDASMDRDARQELLLGGFGFQCNCNRCSQGD 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3134 355 ProSiteProfiles SET domain profile. 48 325 IPR001214 GO:0005515
Prci1g3134 355 Gene3D - 144 225 - -
Prci1g3134 355 Pfam SET domain 59 292 IPR001214 GO:0005515
Prci1g3134 355 Gene3D - 92 143 - -
Prci1g3134 355 CDD SET_SMYD 239 351 - -
Prci1g3134 355 Gene3D SET domain 316 351 IPR046341 -
Prci1g3134 355 Gene3D SET domain 61 292 IPR046341 -
Prci1g3134 355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 353 - -
Prci1g3134 355 SUPERFAMILY SET domain 50 346 IPR046341 -
Prci1g3134 355 SUPERFAMILY SET domain 48 349 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3134 Prci-Chr1 49416526 49420067 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g3134 SET 4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3134 - - pcin:129308775 687.952