Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3133 ATGTCACGGTCACTGTGTAAGCATTGGAGCAGGTTGGTTACGCCATTCAGAATAGCAAATTGTGGCGAGAGACTTCAACTCACGGCATTCTCCTCTTCCACAACCTCAGCGGAGCATGACAGTCCCAGTCGACCCGGTCCGCCTCCGATTCGGGTGGGCTTCACCGAATCAGCTGGGCGTGGTGTATTTGCCACTCGAGCCATCGGAGCCGGAGATCTCATCCACACCTCCAAACCCTTTCTGTGCCACCCTTCTCCCTCATGTATCCACGCTGTTTGTTACTTTTGCCTCAGAGAGCTTCGAAATTCGACCAACCCGGTAGATGCGGGCGCATCATTTTGTAGTGAAGAATGCAAAGAATGTTCTAAGGAGTTTTATGATGTTGAAATGAAAGCGAATTGGATGGCTTTTGATGCTTATTGCCATGATCTGATCTCTTTGCCAAGGACCCATGGTTTGAAATATCCATTTCTGGTAAAACGTTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATTGACAGTCTTGACATACTTCAACCTGCCAGCTTGACACCTGAGATGATACTAGAGTTGGAAGAGGGTTTTGCCTTGTTAAGGAATGCCTTGACGAAGACACTTATTGCGTATGAAGATATTGCTTTTTTAAGCAAGCAATGGTACATTAGTGTTCTGGCACGAATTCGTATCAATGCATTTCGAGTTGAACTGGCTAGAGGCTTGTATGAAGATCTGCTATCATCTGCAGTTGCATCTGTAGAAGCCGAAGCTTCTGTTGGAAATGCTGTCTACATACTTCCATCTTTCTACAATCATGACTGTGATCCTAATGCACATATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCCGTAACATTGAGGAAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCATGGACCGTGATGCTCGACAAGAACTTCTGCTTGGAGGATTTGGTTTTCAATGCAATTGCAATAGATGCTCACAAGGCGACTAG 1014 0.4536 MSRSLCKHWSRLVTPFRIANCGERLQLTAFSSSTTSAEHDSPSRPGPPPIRVGFTESAGRGVFATRAIGAGDLIHTSKPFLCHPSPSCIHAVCYFCLRELRNSTNPVDAGASFCSEECKECSKEFYDVEMKANWMAFDAYCHDLISLPRTHGLKYPFLVKRLACMIISGVASIDSLDILQPASLTPEMILELEEGFALLRNALTKTLIAYEDIAFLSKQWYISVLARIRINAFRVELARGLYEDLLSSAVASVEAEASVGNAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRNIEEGEELRICYIDASMDRDARQELLLGGFGFQCNCNRCSQGD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3133 337 SMART set_7 48 313 IPR001214 GO:0005515
Prci1g3133 337 SUPERFAMILY SET domain 48 331 IPR046341 -
Prci1g3133 337 ProSiteProfiles SET domain profile. 48 307 IPR001214 GO:0005515
Prci1g3133 337 Gene3D - 150 232 - -
Prci1g3133 337 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 335 - -
Prci1g3133 337 Pfam SET domain 59 306 IPR001214 GO:0005515
Prci1g3133 337 Gene3D SET domain 61 333 IPR046341 -
Prci1g3133 337 Gene3D - 92 149 - -
Prci1g3133 337 CDD SET_SMYD 246 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3133 Prci-Chr1 49416526 49420067 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g3133 SET 1.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3133 - - pcin:129308775 652.899