Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3132 ATGTCACGGTCACTGTGTAAGCATTGGAGCAGGTTGGTTACGCCATTCAGAATAGCAAATTGTGGCGAGAGACTTCAACTCACGGCATTCTCCTCTTCCACAACCTCAGCGGAGCATGACAGTCCCAGTCGACCCGGTCCGCCTCCGATTCGGGTGGGCTTCACCGAATCAGCTGGGCGTGGTGTATTTGCCACTCGAGCCATCGGAGCCGGAGATCTCATCCACACCTCCAAACCCTTTCTGTGCCACCCTTCTCCCTCATGTATCCACGCTGTTTGTTACTTTTGCCTCAGAGAGCTTCGAAATTCGACCAACCCGGTAGATGCGGGCGCATCATTTTGTAGTGAAGAATGCAAAGAATGTTCTAAGGAGTTTTATGATGTTGAAATGAAAGCGAATTGGATGGCTTTTGATGCTTATTGCCATGATCTGATCTCTTTGCCAAGGACCCATGGTTTGAAATATCCATTTCTGGTAAAACGTTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATTGACAGTCTTGACATACTTCAACCTGCCAGCTTGACACCTGAGATGATACTAGAGTTGGAAGAGGGTTTTGCCTTGTTAAGGAATGCCTTGACGAAGACACTTATTGCGTATGAAGATATTGCTTTTTTAAGCAAGCAATGGTACATTAGTGTTCTGGCACGAATTCGTATCAATGCATTTCGAGTTGAACTGGCTAGAGGCTTGTATGAAGATCTGCTATCATCTGCAGTTGCATCTGTAGAAGCCGAAGCTTCTGTTGGAAATGCTGTCTACATACTTCCATCTTTCTACAATCATGACTGTGATCCTAATGCACATATTATATGGATAGATAATGCAGATGCAAAATTGAAGGCCCTCCGTAACATTGAGGAAGGACCATTTGGCTTTCGTGAGATCAATGGCTATATGATGAAGTTTTTTTTCTTTTGTTTTTTTGGGCACATCTCAGGTGAAGAACTCAGAATCTGCTACATTGATGCCAGCATGGACCGTGATGCTCGACAAGAACTTCTGCTTGGAGGATTTGGTTTTCAATGCAATTGCAATAGATGCTCACAAGGCGACTAG 1089 0.4472 MSRSLCKHWSRLVTPFRIANCGERLQLTAFSSSTTSAEHDSPSRPGPPPIRVGFTESAGRGVFATRAIGAGDLIHTSKPFLCHPSPSCIHAVCYFCLRELRNSTNPVDAGASFCSEECKECSKEFYDVEMKANWMAFDAYCHDLISLPRTHGLKYPFLVKRLACMIISGVASIDSLDILQPASLTPEMILELEEGFALLRNALTKTLIAYEDIAFLSKQWYISVLARIRINAFRVELARGLYEDLLSSAVASVEAEASVGNAVYILPSFYNHDCDPNAHIIWIDNADAKLKALRNIEEGPFGFREINGYMMKFFFFCFFGHISGEELRICYIDASMDRDARQELLLGGFGFQCNCNRCSQGD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3132 362 Gene3D - 150 232 - -
Prci1g3132 362 Gene3D SET domain 323 358 IPR046341 -
Prci1g3132 362 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 360 - -
Prci1g3132 362 CDD SET_SMYD 246 358 - -
Prci1g3132 362 Gene3D - 92 149 - -
Prci1g3132 362 SUPERFAMILY SET domain 48 356 IPR046341 -
Prci1g3132 362 ProSiteProfiles SET domain profile. 48 332 IPR001214 GO:0005515
Prci1g3132 362 Pfam SET domain 59 299 IPR001214 GO:0005515
Prci1g3132 362 Gene3D SET domain 61 299 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3132 Prci-Chr1 49416526 49420067 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1g3132 SET 4.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3132 - - pcin:129308775 710.679