Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3091 ATGGGTTCTCTTCCCCATATAGTCGAGGACTGCATGGGCTTCCTCCAACTCTACAGCGATGGCTCCATTTTCCGCAGCAATGACATCAAATTCAAGGATTCTATCGTTGAAGATCACTCCGTCCTCTTTAAGGACTCTCTTTTTCACCAAAGTTTCAATCTTTATCTTCGAATTTACAAGCCCCAACCATCCTCTGATTCTGATCTCACCAAAATGCCTCTGGTAATGTTCTTCCACGGCGGAGGCTTCTGCTTTGGCTCGCGTGTTTGGCCCCACGTTCATAACTGCTGCGTCCGCCTCGCTTCTGGACTCCGGGCGGTGGTGGTGGCGCCCGACTACCGGCTGGCTCCGGAGCACCGGCTCCCGGCGGCGTTGGACGACGCTGTGGAGGCACTGAGGTGGGTTCAGAGGGTGGCGTCCACGGGGGAGGATGCATGGCTGAATGGTGACGACATTGGATTTGACCGCGTGTTTATTGTGGGAGACTCGTCCGGGGGTAATATTGCGCATCATTTGGCGGTTCGGTTTGGATCCGAATCAAGATATTTGGATCCGATTCGCGTACGAGGTTATGTACTGTTGGCGCCATTTTTCGGTGGGGAGGTTCGCACCCACTCAGAGGACGGTCCCTGGGAAGAGGTTTTGAGCCTAGAAATTCTCGACAGATTTTGGAGGCTTTCCCTGCCTGTTGGAAAAAACAGAGACCATCCATTGGCCAACCCATTCGGACCAGAGAGTCCAGATCTGGGACAAGTGCAGCTCGGCCCTATTCTGGTGATCGTAGGAGGAAGAGAATTGCTGAAGGATAGGGCAAAAGATTATGCAGCAAAGCTAAAAGAACTAGGCAAGAATATTGACTACTTTGAGTTTGAGGGAAGACAACATGGCTTTTTCTCGCATGATTCCTACTCACAAGTTGCAGAAGAGGTCGTGCAAATCATTCAAGGATTCATGCTTCAAAATTCTGCTTGA 972 0.5103 MGSLPHIVEDCMGFLQLYSDGSIFRSNDIKFKDSIVEDHSVLFKDSLFHQSFNLYLRIYKPQPSSDSDLTKMPLVMFFHGGGFCFGSRVWPHVHNCCVRLASGLRAVVVAPDYRLAPEHRLPAALDDAVEALRWVQRVASTGEDAWLNGDDIGFDRVFIVGDSSGGNIAHHLAVRFGSESRYLDPIRVRGYVLLAPFFGGEVRTHSEDGPWEEVLSLEILDRFWRLSLPVGKNRDHPLANPFGPESPDLGQVQLGPILVIVGGRELLKDRAKDYAAKLKELGKNIDYFEFEGRQHGFFSHDSYSQVAEEVVQIIQGFMLQNSA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3091 323 Coils Coil 264 284 - -
Prci1g3091 323 PANTHER ARYLACETAMIDE DEACETYLASE 12 298 - -
Prci1g3091 323 SUPERFAMILY alpha/beta-Hydrolases 4 318 IPR029058 -
Prci1g3091 323 Gene3D alpha/beta hydrolase 16 319 IPR029058 -
Prci1g3091 323 Pfam alpha/beta hydrolase fold 75 298 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3091 Prci-Chr1 49280470 49284082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3091 7 304 Carbohydrate Esterase AT5G16080 34.641 3.94e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3091 - - gmx:100803077 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3091 1 49280470 49284082 Prci3g3367 3 44296775 44300260 CCT
Prci1g3091 1 49280470 49284082 Prci1g3091 1 49280470 49284082 ECH
Prci1g3091 1 49280470 49284082 Prci3g3367 3 44296775 44300260 ECH