Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3087 ATGGGCAATAACTGTGTCTTGCAATCTGTTTCGGCCGCTGTCTGGCGAGACCGCCCTCCGGCCGGCAGGCTTCCTCGGCCGGATGTCACCTCCACGGATAGAACTCCGGCAAATGCAGCTCCTGATTCCTCCAAAGTTTCCACTGCTCCTGAGGGTCCTGACCCTTCAGGTGCGGGTCAGAGTAGACGACCTGAAACGATGGAGATTGCCGATGTCGAATCCAAACCATGGGAGCCTGAAAAGCCTCCCGCTGATGCAGCGAAAGCTGACAAATTCATTCACGTTAAAAGAGCGTCCAGTGCTGGACGTCAAATTGAATCGGTGTTAGGAAGAAAAACTCAAAACTTGAAGGATGTGTATCTGGGGAGGAAGCTAGGACAAGGGCAATTTGGGACGACATTCTTTTGTACAGAGAAGACAACTGGAAAAGAGTTCGCTTGTAAAACGATCGCCAAGAGAAAATTGACAACTCTTGAGGACGTGGAAGATGTTAGAAGGGAGATTCAGATAATGCGCCATTTGGTTGGTCACCCCAATGTGATACAAATAGTCGGTGTATACGAGGACGCCGTTGCCGTAAATCTTGTTATGGAATTTTGTTCTGGTGGGGAGCTTTTTGACAGGATCATACAGAGAGGACACTACACTGAGAGGAAGGCTGCTGAGCTCGCAAGGGTAATACTCCGTTTACTCCGTGTTGTGGAGGCCTGCCATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCAGAGAATTTTCTGTTCTCCGGCCAGGAAGAAGATTCATTTCTCAAGACAATAGATTTTGGGCTTTCTGTGTTCTTCCAACCTGGTCAATCATTCACCGATGTAGTTGGCAGCCCATATTATGTGGCCCCTGAAGTTGTGCTGAAGCACTATAGTCAAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATATTACTATGTGGAGTTCCGCCATTTTGGGATGAGACTGAGGAAGGAATTTTTGAGCAAATTTTGAGAGGAGAACCTGACTTTATCTCTGAACCATGGCCTAGCATATCTGAAAGTGCAAAGGACCGTAGAATGCTAATAAAGGACCCTAAAAATAGGATGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAAGTTGACAGTGTTGCTTCTGACAAACCTCTTGATTCTGCTGTTTTATCTCGTTTGAAAAAATTTTCTGCTATGAACAAGCTTAAGAAGATGGTCATTCGAGTAATTGTTGAAAGTCTGTCTGAGGAGGAAATTGGAGGGCTGAAAGAAATGTTCAAGATGATAGATGCAGACAATAGCGGACACATTACTCTAGAGGAACTGAAAAATGGATTGGAGAGAGCGGGTGCCAATCTCAAGGAACCTGAAATTGCCAGCTTGTTGCAAGCGGCAGACATTGATAACAGTGGTACCATCGACTATGGTGAATTCTTAGCAGCCATGCTTAATGCAAACAAGGTTCACAGGGAGGAACATCTATTTTCAGCTTTCAACTACTTTGACAAAGATGGGAGTGGGTACATTGCACGAGATGAACTTGAACACGCCTGCGAACAGTTTGGTCTGCTAGATGTTCAACTAGATGACATGATAAAAGAAGTTGACCGGGATAATGTAATTTATTATGTTTTACTAGTTCACATCTTTTCTCATGGACCTCAATATCAGTGTGCTACATAA 1695 0.4501 MGNNCVLQSVSAAVWRDRPPAGRLPRPDVTSTDRTPANAAPDSSKVSTAPEGPDPSGAGQSRRPETMEIADVESKPWEPEKPPADAAKADKFIHVKRASSAGRQIESVLGRKTQNLKDVYLGRKLGQGQFGTTFFCTEKTTGKEFACKTIAKRKLTTLEDVEDVRREIQIMRHLVGHPNVIQIVGVYEDAVAVNLVMEFCSGGELFDRIIQRGHYTERKAAELARVILRLLRVVEACHSLGVMHRDLKPENFLFSGQEEDSFLKTIDFGLSVFFQPGQSFTDVVGSPYYVAPEVVLKHYSQECDVWSAGVIIYILLCGVPPFWDETEEGIFEQILRGEPDFISEPWPSISESAKDXRRMLIKDPKNRMTAHEVLCHPWVQVDSVASDKPLDSAVLSRLKKFSAMNKLKKMVIRVIVESLSEEEIGGLKEMFKMIDADNSGHITLEELKNGLERAGANLKEPEIASLLQAADIDNSGTIDYGEFLAAMLNANKVHREEHLFSAFNYFDKDGSGYIARDELEHACEQFGLLDVQLDDMIKEVDRDNVIYYVLLVHIFSHGPQYQCAT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3087 565 FunFam Calcium-dependent protein kinase 5 205 387 - -
Prci1g3087 565 MobiDBLite consensus disorder prediction 1 88 - -
Prci1g3087 565 Pfam EF-hand domain pair 427 487 IPR002048 GO:0005509
Prci1g3087 565 ProSitePatterns EF-hand calcium-binding domain. 435 447 IPR018247 -
Prci1g3087 565 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Prci1g3087 565 FunFam Calcium-dependent protein kinase 1 121 204 - -
Prci1g3087 565 Pfam EF-hand domain 499 525 IPR002048 GO:0005509
Prci1g3087 565 Pfam Protein kinase domain 122 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3087 565 PANTHER SERINE/THREONINE-PROTEIN KINASE 112 544 - -
Prci1g3087 565 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Prci1g3087 565 ProSiteProfiles EF-hand calcium-binding domain profile. 422 457 IPR002048 GO:0005509
Prci1g3087 565 MobiDBLite consensus disorder prediction 31 45 - -
Prci1g3087 565 Gene3D Transferase(Phosphotransferase) domain 1 205 403 - -
Prci1g3087 565 CDD STKc_CAMK 121 378 - -
Prci1g3087 565 CDD EFh 427 487 IPR002048 GO:0005509
Prci1g3087 565 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Prci1g3087 565 ProSitePatterns Protein kinases ATP-binding region signature. 125 152 IPR017441 GO:0005524
Prci1g3087 565 SMART serkin_6 119 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3087 565 MobiDBLite consensus disorder prediction 66 88 - -
Prci1g3087 565 FunFam calcium-dependent protein kinase SK5 416 488 - -
Prci1g3087 565 ProSiteProfiles Protein kinase domain profile. 119 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3087 565 SUPERFAMILY Protein kinase-like (PK-like) 113 399 IPR011009 -
Prci1g3087 565 Gene3D Phosphorylase Kinase; domain 1 121 204 - -
Prci1g3087 565 SMART efh_1 462 490 IPR002048 GO:0005509
Prci1g3087 565 SMART efh_1 498 526 IPR002048 GO:0005509
Prci1g3087 565 SMART efh_1 426 454 IPR002048 GO:0005509
Prci1g3087 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Prci1g3087 565 Gene3D - 404 548 - -
Prci1g3087 565 SUPERFAMILY EF-hand 419 544 IPR011992 -
Prci1g3087 565 CDD EFh 498 544 IPR002048 GO:0005509
Prci1g3087 565 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3087 Prci-Chr1 49246785 49251935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3087 1 544 EF-hand Containing Proteins AT2G38910 69.107 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci1g3087 Pkinase 3.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3087 K13412 - zju:107433607 781.171