Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3086 ATGGAGAAAGCAAATTCGAGTGGGTTGGCAAGGACGAGATCCGAGCAGCTGGTGGAGAAGGTGGTTGCAGCGCTGAAGTCAGCGCCGTCGAGTGAGTCGATGAACGGAATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCTCGGAAGTCAAGTAGGAGGATGTCGCCGGGAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGATGACGTAGGCAGCGGCGCCGCCCTCAGCCGAGCTTCCAGCGCCAGCTCGGGCCTCTCTTTCTCCTTCACTGGCTTCACTATTACTCCTGATGAAACCACTGACTCTAAACCTTTCAGGGACGAAGACATTCGATTGCATATGTATATTGCAGCGGAGGATATTGAAGCTGGAACTTGCCACCTCAAGTTTCAAACGGAACCCACTTTGCCGATTTTTCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAAGGCATGACAGCAAATGAGGAGAAGGATATCTTGAATGGGATCACTGGCTCTGTGAATCCAGGAGAAGTTTTGGCGCTGATGGGACCCTCAGGGAGCGGAAAGACTACCCTTTTGAATCTGCTTGGAGGCCGGCTGATTCAGTCCACTGCTGGTGGTTCTATCACTTACAATGACCAGCCGTATACCAAATATCTTAAAAGCAAGATAGGCTTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACATACGCAGCCCGGCTGCGACTTCCCGATACATTCACAAAGGACCAAAAGGAAAAACGAGCTTTGGATGTCATCTATGAGCTTGGCTTAGAAAGATGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTTTTTCTGGACGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTGTTTCACAAATTCGATAAGTTGATCCTGCTAGGAAAAGGCAGCTTGCTGTACTTTGGCAAGGCATCTGAAGCAATACCTTACTTCCAATCTATAGGATGCTCCCCTCTTATTGCCATGAATCCGGCAGAGTTTTTGCTAGACCTCGCCAATGGAAACGTAAATGATGTTTCTGTACCGTCCGAGTTGGAGGATAAAGTGCAGATCATGGGAAATGCAGAAGTTAAAACAAAGAATGGGAAACCATCACCAGCAATGGTACATGAGTATCTAGTAGAAGCATACGAGACTCGAGTTTCAGAAACAGAGAAGAGAAAGCTAATGGTGCCCATCCCACTTGATGAATCACTGAAGTCCAAGGTTTGTTCCCCTAAAAGACAGTGGGGTGCAAGGTGGTGTGAGCAATATTCCATACTGTTCTGCAGAGGAATTAAAGAACGGAGGCACGACTACTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCCACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGGCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGACTAAGTGCATATTTTGTGGCTAGGACAACAAGTGACGTTCCGTTGGACTTGATACTACCAGTACTGTTCCTGCTGGTTGTTTATTTCATGGCCGGTCTGAGACTAAGTGCGGACTCCTTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCGGCTCAGGGACTTGGACTGGCTATTGGGGCCACACTAATGGACCTGAAGAAGGCAACTACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTAGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACGTATAAACTTTTGTTGAAAGTGCAACATGGAGGCCTGCCGCGAGGCATAAATGGGATGAGAATTGACGATGGGTGGACGGAGGTTGGTGCTCTGATAGCAATGGTTTTTGGTTATCGATTATTGGCTTACCTTTCCTTGCGGCGGATGAAACTTCCATGCGGAGTTTAG 2244 0.4666 MEKANSSGLARTRSEQLVEKVVAALKSAPSSESMNGIMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDDVGSGAALSRASSASSGLSFSFTGFTITPDETTDSKPFRDEDIRLHMYIAAEDIEAGTCHLKFQTEPTLPIFLKFKDVSYKVVIKGMTANEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYTKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPDTFTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAIPYFQSIGCSPLIAMNPAEFLLDLANGNVNDVSVPSELEDKVQIMGNAEVKTKNGKPSPAMVHEYLVEAYETRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSADSFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQHGGLPRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGV 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3086 747 CDD ABCG_EPDR 147 378 - -
Prci1g3086 747 Pfam ABC-2 type transporter 493 699 IPR013525 GO:0016020|GO:0140359
Prci1g3086 747 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 103 735 - -
Prci1g3086 747 ProSitePatterns ABC transporters family signature. 296 310 IPR017871 GO:0005524|GO:0016887
Prci1g3086 747 MobiDBLite consensus disorder prediction 28 65 - -
Prci1g3086 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 388 IPR027417 -
Prci1g3086 747 Gene3D - 149 389 IPR027417 -
Prci1g3086 747 FunFam ABC transporter G family member 22 160 390 - -
Prci1g3086 747 MobiDBLite consensus disorder prediction 26 71 - -
Prci1g3086 747 Pfam ABC transporter 173 324 IPR003439 GO:0005524
Prci1g3086 747 Pfam ABC-2 type transporter 353 417 IPR043926 GO:0140359
Prci1g3086 747 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 396 IPR003439 GO:0005524
Prci1g3086 747 SMART AAA_5 182 373 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3086 Prci-Chr1 49228369 49237221 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3086 172 410 Calmodulin-binding Proteins AT2G36910 29.508 4.06e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3086 K05681 - gmx:100798801 1173.3