Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3084 ATGGAGAAAGCAAATTCGAGTGGGTTGGCAAGGACGAGATCCGAGCAGCTGGTGGAGAAGGTGGTTGCAGCGCTGAAGTCAGCGCCGTCGAGTGAGTCGATGAACGGAATAATGGATAGTGGGGGAAGCGGAGGAACACTGTCTCGGAAGTCAAGTAGGAGGATGTCGCCGGGAGGGAAAAACAGCCACATAAGGAAGAGTAGGAGTGCTCAGATAAAGGTGGATTTGGATGACGTAGGCAGCGGCGCCGCCCTCAGCCGAGCTTCCAGCGCCAGCTCGGGCCTCTCTTTCTCCTTCACTGGCTTCACTATTACTCCTGATGAAACCACTGACTCTAAACCTTTCAGGGACGAAGACATTCCGGAGGATATTGAAGCTGGAACTTGCCACCTCAAGTTTCAAACGGAACCCACTTTGCCGATTTTTCTCAAGTTCAAGGATGTGAGCTACAAGGTGGTGATCAAAGGCATGACAGCAAATGAGGAGAAGGATATCTTGAATGGGATCACTGGCTCTGTGAATCCAGGAGAAGTTTTGGCGCTGATGGGACCCTCAGGGAGCGGAAAGACTACCCTTTTGAATCTGCTTGGAGGCCGGCTGATTCAGTCCACTGCTGGTGGTTCTATCACTTACAATGACCAGCCGTATACCAAATATCTTAAAAGCAAGATAGGCTTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTTACTGTGAAAGAAACACTTACATACGCAGCCCGGCTGCGACTTCCCGATACATTCACAAAGGACCAAAAGGAAAAACGAGCTTTGGATGTCATCTATGAGCTTGGCTTAGAAAGATGCAAAGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCTGGAGGAGAGAGGAAAAGAGTTTGCATCGGTAATGAGATTATAATCAATCCTTCGCTTCTTTTTCTGGACGAACCAACTTCTGGTTTGGATTCTACAACAGCCTTGAAGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATTCACCAACCATCAAGCAGACTGTTTCACAAATTCGATAAGTTGATCCTGCTAGGAAAAGGCAGCTTGCTGTACTTTGGCAAGGCATCTGAAGCAATACCTTACTTCCAATCTATAGGATGCTCCCCTCTTATTGCCATGAATCCGGCAGAGTTTTTGCTAGACCTCGCCAATGGAAACGTAAATGATGTTTCTGTACCGTCCGAGTTGGAGGATAAAGTGCAGATCATGGGAAATGCAGAAGTTAAAACAAAGAATGGGAAACCATCACCAGCAATGGTACATGAGTATCTAGTAGAAGCATACGAGACTCGAGTTTCAGAAACAGAGAAGAGAAAGCTAATGGTGCCCATCCCACTTGATGAATCACTGAAGTCCAAGGTTTGTTCCCCTAAAAGACAGTGGGGTGCAAGGTGGTGTGAGCAATATTCCATACTGTTCTGCAGAGGAATTAAAGAACGGAGGCACGACTACTTCAGCTGGTTAAGAATCACCCAAGTTCTCTCCACTGCAGTCATCTTAGGATTACTTTGGTGGCAATCAGATGCTAACAATCCAAAAGGGCTTCAAGACCAGGCAGGGTTACTTTTCTTCATAGCGGTGTTCTGGGGATTCTTTCCGGTGTTCACAGCAATATTCACATTTCCTCAAGAGAGAGCAATGTTGGCAAAGGAGAGAGCAGTTGACATGTACAGACTAAGTGCATATTTTGTGGCTAGGACAACAAGTGACGTTCCGTTGGACTTGATACTACCAGTACTGTTCCTGCTGGTTGTTTATTTCATGGCCGGTCTGAGACTAAGTGCGGACTCCTTTTTCTACAGCATTCTCACTGTCTTCCTCTGCATTGTGGCGGCTCAGGGACTTGGACTGGCTATTGGGGCCACACTAATGGACCTGAAGAAGGCAACTACTCTGGCTTCAGTGACTGTGATGACCTTCATGCTAGCCGGAGGATTTTTCGTAAAGGAAGTACCGAAATTCATATCGTGGATTCGGTACATTTCATTTAACTACCACACGTATAAACTTTTGTTGAAAGTGCAACATGGAGGCCTGCCGCGAGGCATAAATGGGATGAGAATTGACGATGGGTGGACGGAGGTTGGTGCTCTGATAGCAATGGTTTTTGGTTATCGATTATTGGCTTACCTTTCCTTGCGGCGGATGAAACTTCCATGCGGAGTTTAG 2223 0.4678 MEKANSSGLARTRSEQLVEKVVAALKSAPSSESMNGIMDSGGSGGTLSRKSSRRMSPGGKNSHIRKSRSAQIKVDLDDVGSGAALSRASSASSGLSFSFTGFTITPDETTDSKPFRDEDIPEDIEAGTCHLKFQTEPTLPIFLKFKDVSYKVVIKGMTANEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLIQSTAGGSITYNDQPYTKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPDTFTKDQKEKRALDVIYELGLERCKDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAIPYFQSIGCSPLIAMNPAEFLLDLANGNVNDVSVPSELEDKVQIMGNAEVKTKNGKPSPAMVHEYLVEAYETRVSETEKRKLMVPIPLDESLKSKVCSPKRQWGARWCEQYSILFCRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDANNPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLAKERAVDMYRLSAYFVARTTSDVPLDLILPVLFLLVVYFMAGLRLSADSFFYSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKEVPKFISWIRYISFNYHTYKLLLKVQHGGLPRGINGMRIDDGWTEVGALIAMVFGYRLLAYLSLRRMKLPCGV 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3084 740 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 389 IPR003439 GO:0005524
Prci1g3084 740 Gene3D - 142 382 IPR027417 -
Prci1g3084 740 MobiDBLite consensus disorder prediction 28 65 - -
Prci1g3084 740 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 98 728 - -
Prci1g3084 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 381 IPR027417 -
Prci1g3084 740 MobiDBLite consensus disorder prediction 26 71 - -
Prci1g3084 740 Pfam ABC transporter 166 317 IPR003439 GO:0005524
Prci1g3084 740 Pfam ABC-2 type transporter 486 692 IPR013525 GO:0016020|GO:0140359
Prci1g3084 740 FunFam ABC transporter G family member 22 153 383 - -
Prci1g3084 740 Pfam ABC-2 type transporter 346 409 IPR043926 GO:0140359
Prci1g3084 740 CDD ABCG_EPDR 140 371 - -
Prci1g3084 740 SMART AAA_5 175 366 IPR003593 GO:0016887
Prci1g3084 740 ProSitePatterns ABC transporters family signature. 289 303 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3084 Prci-Chr1 49228369 49237543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3084 165 403 Calmodulin-binding Proteins AT2G36910 29.508 3.86e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3084 K05681 - gmx:100798801 1183.32