Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3075 ATGGGAAACAACTGCGTTGGATCAAGAATCTCCAGGGATAAACTATTTCCCACCTTTTCCAGTTCACTCTGGTGGTCACGACCGACTGGGGATATGGTTTCTCCTAGCAGTAAATCATCGTCCAGAAGCGAAGGTCCAAATGTTTCAGAGACTGTTCAAAATAGCCCGCCGGAGATATTGAGAATCGAAAAGGTAGAGATGACACCAATACAGGAGATAAAACCGCCTCAACCTCAAAAACTGGACGAAGAGATTAAATCTTCCAAGCCACCAATGGAGGAATCACGACTGCCCCACTCGGTGACGCTGAGGCGTGCGGAAGAGGATGGACCGATTCCGACGAGTGTACAAAAGGAAGAGATTGTTCAACCAGTGGAACCTGCAAAACCAAAGAAGCCCCATAAGGTGAAGAGGCTCGCATCTGCTGGGCTGCAAGCAGATTCTGTCTTGCAAACAAAAACTGGTCATCTTAAAGAGTTCTATAAATTGGGGCGAAAGCTTGGACATGGGCAGTTTGGAACGAGTTTCCTTTGTGTTGAGAAAGCTACGGGTAAAGAGTATGCCTGCAAGTCCATTGCTAAGCGAAAATTGCTGGCATATGAAGATGTGGAGGATGTGAGGAGGGAGGTTCAGATAATGCATCACTTGTCAGGATGCCCAAATGTGATATCCATAAAAGGGGCTTATGAAGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGCAGGGGGTGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTTAGCGTTATAGAAGCTTGTCACTCCCTTGGAGTGATGCATCGTGATCTTAAGCCTGAGAATTTTCTTTTCGTTAGTAAGCATGAAGACTCCCCCCTTAAGGCCATCGATTTTGGATTGTCTACATTTTTCAAACCAGGAGAAACTTTCACAGACGTAGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGCGCAAGTGTTATGGTCCAGAAGCAGACGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGGGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCGATGAAGTTTTGCGTGGGAAGCTTGATTTCTCATCAGATCCTTGGCCTAAAATCTCAGAAAGTGCTAAAGACTTAGTGAGGAAGATGCTTAATAGAGATCCAAGAAAACGGATAACTGCTCATGAAGTTCTTTGTCATCCTTGGATACGAATTAATGGAGAAGCTCTAGACAAACCTCTTGATCCGGCAGTCTTGAGTCGCCTGAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCTATAAGAGTGATTGCAGAGAAGCTCTCTGAAGAAGAAATTGCTGGATTGAAAGAAATTTTTAAGACGATAGACACGGACAACAGTGGTCAAATTACATTGGAAGAACTAAAGAATGGACTGAAAAAGTTCGGTGCTGATCTGAATGAATCAGAATTACAAAATGTAATGCAAGCTGCAGATGTAAATAACAGTGGAGCAATTGACTACAAAGAATTCATAGCTGCCACATTGCATTTAAATAAAATTGAGAAGGAAGACCACTTAGTTGCAGCTTTCTCATACTTCGATAAAGATGGAAGCGGCTACATCACACCAGATGAACTTCAACTAGCTTGCCAAGAATTTGGCATAGAAGATTTCCACTTAGAAGAAATTATCAGGGAGGCAGATCAAGATAACGACGGGCAAATAGATTACAAGGAATTTGTTGCAATGATGCAGAGAGGCAACACAGAGATGGGGAAAAAGGGTCAAAGAGGTAGCAATAGATTCGAGATTGGATATAGGGAGGTGCTATCAGTCTATTAA 1881 0.4301 MGNNCVGSRISRDKLFPTFSSSLWWSRPTGDMVSPSSKSSSRSEGPNVSETVQNSPPEILRIEKVEMTPIQEIKPPQPQKLDEEIKSSKPPMEESRLPHSVTLRRAEEDGPIPTSVQKEEIVQPVEPAKPKKPHKVKRLASAGLQADSVLQTKTGHLKEFYKLGRKLGHGQFGTSFLCVEKATGKEYACKSIAKRKLLAYEDVEDVRREVQIMHHLSGCPNVISIKGAYEDPVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSKHEDSPLKAIDFGLSTFFKPGETFTDVVGSPYYVAPEVLRKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFDEVLRGKLDFSSDPWPKISESAKDLVRKMLNRDPRKRITAHEVLCHPWIRINGEALDKPLDPAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKTIDTDNSGQITLEELKNGLKKFGADLNESELQNVMQAADVNNSGAIDYKEFIAATLHLNKIEKEDHLVAAFSYFDKDGSGYITPDELQLACQEFGIEDFHLEEIIREADQDNDGQIDYKEFVAMMQRGNTEMGKKGQRGSNRFEIGYREVLSVY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3075 626 FunFam Calcium-dependent protein kinase 1 427 601 - -
Prci1g3075 626 SMART serkin_6 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3075 626 ProSitePatterns EF-hand calcium-binding domain. 475 487 IPR018247 -
Prci1g3075 626 CDD EFh 538 598 IPR002048 GO:0005509
Prci1g3075 626 Pfam Protein kinase domain 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3075 626 ProSiteProfiles EF-hand calcium-binding domain profile. 462 497 IPR002048 GO:0005509
Prci1g3075 626 FunFam Calcium-dependent protein kinase SK5 247 431 - -
Prci1g3075 626 SUPERFAMILY EF-hand 458 599 IPR011992 -
Prci1g3075 626 MobiDBLite consensus disorder prediction 21 98 - -
Prci1g3075 626 FunFam Calcium-dependent protein kinase 1 163 246 - -
Prci1g3075 626 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Prci1g3075 626 Gene3D Transferase(Phosphotransferase) domain 1 247 443 - -
Prci1g3075 626 CDD EFh 467 526 IPR002048 GO:0005509
Prci1g3075 626 ProSitePatterns EF-hand calcium-binding domain. 581 593 IPR018247 -
Prci1g3075 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Prci1g3075 626 MobiDBLite consensus disorder prediction 77 98 - -
Prci1g3075 626 MobiDBLite consensus disorder prediction 21 56 - -
Prci1g3075 626 Gene3D Phosphorylase Kinase; domain 1 163 246 - -
Prci1g3075 626 ProSitePatterns EF-hand calcium-binding domain. 547 559 IPR018247 -
Prci1g3075 626 ProSiteProfiles EF-hand calcium-binding domain profile. 534 569 IPR002048 GO:0005509
Prci1g3075 626 PANTHER SERINE/THREONINE-PROTEIN KINASE 151 593 - -
Prci1g3075 626 SMART efh_1 466 494 IPR002048 GO:0005509
Prci1g3075 626 SMART efh_1 502 530 IPR002048 GO:0005509
Prci1g3075 626 SMART efh_1 572 600 IPR002048 GO:0005509
Prci1g3075 626 SMART efh_1 538 566 IPR002048 GO:0005509
Prci1g3075 626 Pfam EF-hand domain pair 538 598 IPR002048 GO:0005509
Prci1g3075 626 Pfam EF-hand domain pair 467 527 IPR002048 GO:0005509
Prci1g3075 626 SUPERFAMILY Protein kinase-like (PK-like) 160 420 IPR011009 -
Prci1g3075 626 ProSiteProfiles Protein kinase domain profile. 161 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g3075 626 CDD STKc_CAMK 160 418 - -
Prci1g3075 626 Gene3D - 444 603 - -
Prci1g3075 626 ProSiteProfiles EF-hand calcium-binding domain profile. 572 603 IPR002048 GO:0005509
Prci1g3075 626 Coils Coil 484 504 - -
Prci1g3075 626 ProSiteProfiles EF-hand calcium-binding domain profile. 498 533 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3075 Prci-Chr1 49175623 49179265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3075 1 605 EF-hand Containing Proteins AT3G10660 65.238 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Prci1g3075 Pkinase 4.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3075 K13412 - qsa:O6P43_005746 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g2763 3 39727586 39730777 Prci1g3075 1 49175623 49179265 CCT