Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3061 ATGATGAGCGACGCCACAGGTTCGTCTGGGTTCATATCATCAGGGTTTTGGTATTTCGTTGGGGTTTCTATTGGGGTTCTGGTTATCATCACCGCTCTCACCATTGCTTCCTACTTGTGCGCTCGCTCACGCCTTCCCATTCCTCTGCCCCCACACAGGATTAATGCTCTCCATCACTCGCAGCCTCATCTTTCCGCAGTTGAAGTGCAAGGGATTGACGAGGCCACCATTCTGGGTTACCCCAAGCTGCTATTTTGTGAAGCCAATAAGCTCAAGGACTCTGACGGCCACGGACCCAACGCTGCCACTTGTTGCTCCATATGCCTGTCGGATTACAATGACACGGATACGGTTCGGGTACTGCCCGAATGTGACCACCTCTTCCACCTCCCCTGCGTAGATCCTTGGCTTAGAATGCATCCCACATATCCTAACTGCCGAACATCTCCCCTGTCAACCCCTCCGGCTCAGGTGGTTTACTCCACTGCTGACTCTGCTTCTTAG 504 0.5298 MMSDATGSSGFISSGFWYFVGVSIGVLVIITALTIASYLCARSRLPIPLPPHRINALHHSQPHLSAVEVQGIDEATILGYPKLLFCEANKLKDSDGHGPNAATCCSICLSDYNDTDTVRVLPECDHLFHLPCVDPWLRMHPTYPNCRTSPLSTPPAQVVYSTADSAS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3061 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 151 IPR013083 -
Prci1g3061 167 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Prci1g3061 167 SUPERFAMILY RING/U-box 104 151 - -
Prci1g3061 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 156 IPR045899 -
Prci1g3061 167 Pfam Ring finger domain 105 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3061 Prci-Chr1 49090509 49091293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3061 15 154 C3H Transcription Factor Family AT5G06490 43.038 8.77e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3061 - - qsa:O6P43_009684 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3061 1 49090509 49091293 Prci3g2773 3 39771409 39772519 CCT