Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3016 ATGGCTGACAAGTCTTTTCGCGCCAGAGGCTGCTGTTGCTGCCTCTTCAGCCTCCTCTGGAAGTTGCTAGTCGCCATCATCGTCATCGTTGGCCTCGCCGTCCTCATCTTCTGGCTCATCGTCCAGCCTCGCTCCTTCAAGTTCTACGCTTCCGAAGCCCAGCTCACCCAATTCGACTACGATAATAATACTCTCCGATACAACCTTGTCCTCAACTTCACCGCCCGTAACCCTAACAAAAAGCTTGGAATCTACTACGACAAAGTTCAAGGCGTGGCGCTGTACCAGGATGAAAGGTTTGGCAACACCGACGTCATCACCTTCAGGAACTCCTTCCGCCAGGACAAGAAGACCACGGATCCCATGAGCGGCGTCTTCTCTGGCCAGCAGCTGCTGCCGCTGGATGCGCTTCGAGTGTCTCAGTACAACGAAGACAAGCTGGCCGGCGCGTACGACATTGATGTGAAGCTCAACTTCAGGATTAGATTCAGGCTTGGGGATTTCATTACCGGCAGCTATCGTCCGAAGGTCAAATGTGGACTCAAGGTTCCCTTGAGCGCTAATGAAACAACCTCCGGCGGATTTCAGCCCACTAAATGCAGAGTCGACTTTTGA 615 0.5301 MADKSFRARGCCCCLFSLLWKLLVAIIVIVGLAVLIFWLIVQPRSFKFYASEAQLTQFDYDNNTLRYNLVLNFTARNPNKKLGIYYDKVQGVALYQDERFGNTDVITFRNSFRQDKKTTDPMSGVFSGQQLLPLDALRVSQYNEDKLAGAYDIDVKLNFRIRFRLGDFITGSYRPKVKCGLKVPLSANETTSGGFQPTKCRVDF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3016 204 Pfam Late embryogenesis abundant protein 73 179 IPR004864 -
Prci1g3016 204 PANTHER OS05G0367900 PROTEIN 9 188 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3016 Prci-Chr1 48805224 48806113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3016 40 194 SNARE and Associated Proteins AT1G32270 32.692 1.32e-22 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3016 - - gmx:100795302 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3016 1 48805224 48806113 Prci1g3016 1 48805224 48806113 ECH