LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g3015	ATGGCTGCTAAACACTCCCAACTGAACGGGGCCTACTATGGCCCATCCATCCCTCCTCCCACCTCCTACCATCGACCAGGCCGCCGCGTCCACTTCGGTCTCTGCTCCTGCATCTTCAATCTCCTCCTCACCATCGTCGTCGTCGTCGGCCTCGCCGTTTTCTTGTTCTGGCTCATCGTCCGCCCCAACGCTGTCAAATTCCACGTCACCGATGCCTCCCTCACTCAATTCAACTACACCTCTAACAACACCCTCTTTTACAATCTCTCCCTCAATATCACCGCCCGAAACCCCAACCGCAGGCTCGGCCTCTATTACGACAAAATCCGAGCCTCGGCTTCGTACCAGGATGCGTGGTTCGATTCTCAGACTCTGACACCCTTCTATCAGGGCCACAAGACCACGGATTTTTTGAACCCTGTCTTCGTGGGTCAACGCTTCTTGCTTCTTGATTCCACCCAGGCTTCGGAGTTGAGCAAGGATCAGAGCTCTGGGCTTTATGATATCGACGTGACCCTGCATCTCAAGATAAGGTTCAAGTTAGGAGCCTTGAAGACCTTCAAGTTGAAGCCCAAGGTTAAATGCGACTTGTCATCACTTCCTCTCACTCCCACCAGTACACCTGACGGAGGCTCATCCGCCGGTGGTTTTCAGATCAAGCGGTGCGATCTCGATTACTGA	681	0.536	MAAKHSQLNGAYYGPSIPPPTSYHRPGRRVHFGLCSCIFNLLLTIVVVVGLAVFLFWLIVRPNAVKFHVTDASLTQFNYTSNNTLFYNLSLNITARNPNRRLGLYYDKIRASASYQDAWFDSQTLTPFYQGHKTTDFLNPVFVGQRFLLLDSTQASELSKDQSSGLYDIDVTLHLKIRFKLGALKTFKLKPKVKCDLSSLPLTPTSTPDGGSSAGGFQIKRCDLDY	226

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g3015	226	PANTHER	OS05G0367900 PROTEIN	35	198	IPR044839	GO:0098542
	Prci1g3015	226	Pfam	Late embryogenesis abundant protein	92	195	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g3015	Prci-Chr1	48795784	48796873	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g3015	59	211	SNARE and Associated Proteins	AT1G32270	38.562	1.83e-28	108

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g3015	-		-	gmx:100793187	275.404