Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3008 ATGTCTAGCTCCAGAAAGAAGCTTTTTTTCAACACCGTGTCCGTCGACCTGGGCTGCGGCAGTTGCAGGAAACCAAGGATTTCTCTTTCTCACATCCTTTACCCCAAGACTAAGCCTCGCAAGCCAACTAACCAAAAGCTCCCGCTTCACAACTATTGTTCTTCAAGCTCCTGGGACAACGACAACACCACCTCCATATTCTCTCCTTACGGCAGCTCTTCTCAGTTTTCCAGCTGCGACAACACCGCGAGGGCGCCGAAGACGGTGAGGGGTCTGGGCAGGGTGGGAGGCCAAGGCGTGGCGGTGGAGAAAGATTCTGACGACCCTTATTTGGACGTTAGGCATTCCATGCTCCAAATGATACTGGAGAACGAGATTTACGCCGCGGATGATCTCAGAAAGCTTCTGCAGTGCTTTCTTCGGCTCAATTCGCCGCACCACCATGGGGTTATTGTCAGAGCTTTCACGGAGATCTGGAATGGGGTGCATTCTGTGAAGCCCAGCTCACCCAAGCTTTGCTTGTCGCGCAAGTCACGGTGGAAATCTTCAATTCTAGATTGTATGGCGGAAACATGA 576 0.5191 MSSSRKKLFFNTVSVDLGCGSCRKPRISLSHILYPKTKPRKPTNQKLPLHNYCSSSSWDNDNTTSIFSPYGSSSQFSSCDNTARAPKTVRGLGRVGGQGVAVEKDSDDPYLDVRHSMLQMILENEIYAADDLRKLLQCFLRLNSPHHHGVIVRAFTEIWNGVHSVKPSSPKLCLSRKSRWKSSILDCMAET 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3008 191 NCBIfam uncharacterized plant-specific domain TIGR01568 100 160 IPR006458 -
Prci1g3008 191 ProSiteProfiles OVATE domain profile. 102 161 IPR006458 -
Prci1g3008 191 Pfam Transcriptional repressor, ovate 106 161 IPR006458 -
Prci1g3008 191 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 162 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3008 Prci-Chr1 48717351 48720073 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci1g3008 Ovate 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3008 - - mtr:25499452 205.297