Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3007 ATGGTGAAGAAAATGAAGCTACCGTTTCTCGTCAAGAAGTCAGAAATGAGGTCGCCTTCTTCTCCCTGGGCGTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAATAACACCGACTTGTTCAATTCCAATATCAACTCGGATTCCACTGCAGTGGAAGTCGACCCAATAGAGACCTTGGTTCGTAGCTTGCAGTCGAACCGGCGGCGGCTTTTCTTCGAACCAGATGAGACTAGCTCCATATTAGAGACGAAGGCTTCTACAGGAGGACGCGTGCCATTCAAAGACAGCTTGGTGCTATCCATGGAGTCTCGGGACCCTTACGTAGACTTTCGAAAGTCCATGGAGGAGATGGTGGAGGCTCACGCCCTCAACCACTTGGAGGCTCTGCAGGAGCTTCTGTGTTGGTATTTGAGGGTCAATTCCAAAAGCAATCACGCCTCTATTCTGGCAGCCTTTGTCGATTTACTAGTTGGCTTTGCTTCGGTTCCTTCTTCCTCTCCTTCTCCTTCTCCTTTTTCTCCTCTATCTTTTTCTAGCTCGTCTCTGGCTTCTTCCTTTGGTACACGCTGCGTTAATTATTCTTCTTTAGAAGCAGGCGAAGAGGTTGGGGCAACTGATCCCGCTTCAACTTTGGCTTCGTTGTCACAAGTTAAAGGGGATATTATTGACCATCATGACGAGGCTTCTTCTTCCAATGCTTGA 714 0.4874 MVKKMKLPFLVKKSEMRSPSSPWAWPSCHQPRTLSFRANNTDLFNSNINSDSTAVEVDPIETLVRSLQSNRRRLFFEPDETSSILETKASTGGRVPFKDSLVLSMESRDPYVDFRKSMEEMVEAHALNHLEALQELLCWYLRVNSKSNHASILAAFVDLLVGFASVPSSSPSPSPFSPLSFSSSSLASSFGTRCVNYSSLEAGEEVGATDPASTLASLSQVKGDIIDHHDEASSSNA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3007 237 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Prci1g3007 237 Pfam Transcriptional repressor, ovate 107 162 IPR006458 -
Prci1g3007 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 163 IPR038933 GO:0045892
Prci1g3007 237 NCBIfam uncharacterized plant-specific domain TIGR01568 103 163 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3007 Prci-Chr1 48706192 48708223 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci1g3007 Ovate 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3007 - - pcin:129284674 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3007 1 48706192 48708223 Prci1g0164 1 1545581 1546590 ECH
Prci1g3007 1 48706192 48708223 Prci1g3007 1 48706192 48708223 ECH