Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2994 ATGGGCGCAATGATGGCAAGGATTAGTTGCCCGCACCTCGCTGGGCTTGCAGGTGTCAACGAAGCCCGAGTAAAAATTTATTCTTGGATCGCTTCTGAATCCTCTTTTCCACTTTCCCGTTTCCAGTCTCCACACCCTGCCTACGAGCAGTCGAGCACTGCCGTTTCCTTGCGACTTGCGATGGCAGCAATCACAAGATTCCTTGGCACCAGTTCTGCTTTGCGTCGATTGTCACTTGTTTCTCCTGCTCTCCTCAGTTTTCGCAGAGGAATTGCTTACAAACTGTTTGTTGGAGGACTGTCGTTTCTCACAACAGAGAAGGGATTGTCAGAAGCATTTTCTGACTTCGGGCAAGTTGTTGAAGCAAAAATTGTGATGGACAGGGTATCAGACAGATCGAAAGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGAGAATGCCATAACAGGGATGAACGGGAAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAACGCAATATTGGTGATGGAATGCCAATTGCCAGGGGACCTCCTGAACCAACAGCACACAGTTAA 579 0.4836 MGAMMARISCPHLAGLAGVNEARVKIYSWIASESSFPLSRFQSPHPAYEQSSTAVSLRLAMAAITRFLGTSSALRRLSLVSPALLSFRRGIAYKLFVGGLSFLTTEKGLSEAFSDFGQVVEAKIVMDRVSDRSKGFGFVTFASEDEAENAITGMNGKALNGRVIFVDYAKPKRNIGDGMPIARGPPEPTAHS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2994 192 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 171 IPR000504 GO:0003723
Prci1g2994 192 SUPERFAMILY RNA-binding domain, RBD 93 184 IPR035979 GO:0003676
Prci1g2994 192 SMART rrm1_1 94 167 IPR000504 GO:0003723
Prci1g2994 192 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 86 178 - -
Prci1g2994 192 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 164 IPR000504 GO:0003723
Prci1g2994 192 Gene3D - 88 175 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2994 Prci-Chr1 48593683 48596481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2994 94 173 Eukaryotic Initiation Factors Gene Family AT2G23350 36.250 4.25e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2994 - - pcin:129307886 360.918