Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2992 ATGCAAATATCAGAGCATTATATAATATGCTTTTGTTTTTGGAGTGTCACGCTTGGCTTTGTCCATGCAGCTCAACTACCTGTCTTGAAGAATGGCTTAAGATTTTCTTTGGGGATGGGCGCAATGATGGCAAGGATTAGTTGCCCGCACCTCGCTGGGCTTGCAGGTGTCAACGAAGCCCGAGTAAAAATTTATTCTTGGATCGCTTCTGAATCCTCTTTTCCACTTTCCCGTTTCCAGTCTCCACACCCTGCCTACGAGCAGTCGAGCACTGCCGTTTCCTTGCGACTTGCGATGGCAGCAATCACAAGATTCCTTGGCACCAGTTCTGCTTTGCGTCGATTGTCACTTGTTTCTCCTGCTCTCCTCAGTTTTCGCAGAGGAATTGCTTACAAACTGTTTGTTGGAGGTTTGCTCTTTCTCTCCTCTCTGTATCTCGCCTCCTCCATTCTCTTCGGACTGTCGTTTCTCACAACAGAGAAGGGATTGTCAGAAGCATTTTCTGACTTCGGGCAAGTTGTTGAAGCAAAAATTGTGATGGACAGGGTATCAGACAGATCGAAAGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGAGAATGCCATAACAGGGATGAACGGGAAGCAGGCACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAACGCAATATTGGTGATGGAATGCCAATTGCCAGGGGACCTCCTGAACCAACAGCACACAGTTAA 744 0.4704 MQISEHYIICFCFWSVTLGFVHAAQLPVLKNGLRFSLGMGAMMARISCPHLAGLAGVNEARVKIYSWIASESSFPLSRFQSPHPAYEQSSTAVSLRLAMAAITRFLGTSSALRRLSLVSPALLSFRRGIAYKLFVGGLLFLSSLYLASSILFGLSFLTTEKGLSEAFSDFGQVVEAKIVMDRVSDRSKGFGFVTFASEDEAENAITGMNGKQALNGRVIFVDYAKPKRNIGDGMPIARGPPEPTAHS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2992 247 Gene3D - 127 230 IPR012677 -
Prci1g2992 247 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 146 233 - -
Prci1g2992 247 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 153 219 IPR000504 GO:0003723
Prci1g2992 247 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 131 226 IPR000504 GO:0003723
Prci1g2992 247 SMART rrm1_1 149 222 IPR000504 GO:0003723
Prci1g2992 247 SUPERFAMILY RNA-binding domain, RBD 152 239 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2992 Prci-Chr1 48593572 48596481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2992 154 228 Eukaryotic Initiation Factors Gene Family AT2G23350 36.000 8.36e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2992 - - pcin:129307886 464.922