Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2985 ATGGAAAATATGCCACCAGGATATCGGTTCTACCCGACAGAAGAGGAGCTGATTTCCTTCTATCTTCATAGAAAGCTCCAAGGAGATCAGAGGGAGGACATCAACCGGGTTATACCCGTGCTTGATATTTATGATTACAATCCTTGGGATCTCCCACAGGTTTCGGGAGAGGCGAGCCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGACAAGAAAGCGAAGCTCGCGGAGGAAGGCCCCGACGACTGACGACGACAGGGTACTGGAAGGCCACTGGGTCCCCAAATCATGTCTATTCCTCTGATAATCGTATCATCGGCATGAAAAGAACTATGGTTTTCTACAACGGAAGAGCCCCCCACGGCCGGAAAACCGATTGGAAGATGAACGAGTACAAGGCCATGGGAGGCGAGCCATCCTCACCTCGCCCAGCTGGTCCTTTGTTAAGGCAGGAATACAGTTTATGCAGGGTATACAAGAAATCAAAGTGCCTGCGAGCGTTTGATAGAAGGCCACCTCCGAGGAGGGAGATGGATGATCATGGGGGTTCAAGCTCAACGTCTCACCATCAACAGCTTCAAAACCCGGAAGACTCGTCGTCAAAGGGGAAGATAGGTATGGCGAGCTCTCCGGAGAGTTCATCGTCTGGAGATCATGCCCAAGCTTCGCAGGTCAGTGGGGAAGCGGCCGGTCAAATGGATTTGGACGATGAGCCTTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGGCAAGCATGACTAG 771 0.5136 MENMPPGYRFYPTEEELISFYLHRKLQGDQREDINRVIPVLDIYDYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPHGRKTDWKMNEYKAMGGEPSSPRPAGPLLRQEYSLCRVYKKSKCLRAFDRRPPPRREMDDHGGSSSTSHHQQLQNPEDSSSKGKIGMASSPESSSSGDHAQASQVSGEAAGQMDLDDEPLLDWEQVDWFLGKHD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2985 256 MobiDBLite consensus disorder prediction 169 186 - -
Prci1g2985 256 MobiDBLite consensus disorder prediction 187 230 - -
Prci1g2985 256 MobiDBLite consensus disorder prediction 169 240 - -
Prci1g2985 256 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Prci1g2985 256 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Prci1g2985 256 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Prci1g2985 256 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 213 - -
Prci1g2985 256 SUPERFAMILY NAC domain 2 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2985 Prci-Chr1 48525054 48526774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2985 7 250 NAC Transcription Factor Family AT5G22380 47.347 1.21e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g2985 NAM 6.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2985 - - gmx:100800056 335.88