Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2971 ATGGATACTTCAAATCCTGCCGTCTTTGTCAATGGAGAGCTGCTACGGTTTTATGTTGGACGGAGGGTGAGGGCTGTTGTGCAAGTTGTTCGATCTGATGCAGGAGCTATAATTGGAAAATCAACTGATGAGAAGCAGATAGTTGTAAAGGGCATCCCCCCGAGTGCTCTCACGAATTTTGTTGAAGTTATTGGCATAGTTGACAGCGATAGATCCATTCGTGCTGAGATATGGACCAACTTTGGTGATTCAATTGATACCTTCAGTTACAATAAGCTTTGCCATCTTGCAAATGGAGAATTCAAGCACTTGTTCCTATGA 321 0.4299 MDTSNPAVFVNGELLRFYVGRRVRAVVQVVRSDAGAIIGKSTDEKQIVVKGIPPSALTNFVEVIGIVDSDRSIRAEIWTNFGDSIDTFSYNKLCHLANGEFKHLFL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2971 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Prci1g2971 106 SUPERFAMILY Nucleic acid-binding proteins 6 105 IPR012340 -
Prci1g2971 106 Gene3D - 1 106 IPR012340 -
Prci1g2971 106 Pfam Replication factor A protein 3 1 102 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2971 Prci-Chr1 48364058 48366680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2971 1 106 Core DNA Replication Machinery Family AT4G18590 66.981 2.12e-53 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2971 K10740 - csav:115698878 164.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2971 1 48364058 48366680 Prci1g2971 1 48364058 48366680 ECH