Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2964 ATGGTGGTGGCAGAGGGGGAAGTGGACTCGTCATTAAAGTCAGACCAAACACTAAAAAACCAAGCAATGTCATCTCTTGGAAGACAGTCTTCAATATATGCTCTCACACTTGACGAGTTCCAGCACAGGCTATGCGAAGAAGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTTCTCAGTAGCATCTGGAACGTGGAAGAAAACCAAACCATCAACAACAGCAATTCCGATGACAAAGGCGCAAGAAAGCAGCCAAGCCTGTCTCGCCAGGGCTCTCTCACCATTCCAACTCCACTCTCTAGAAAAACAGTCGACCAAGTCTGGTCTGAGATACACAACCAGACCACCTACAACAATGGTGATGCTAACAACAACGTTCGGAATTCCGAGTCTGCCCCACGCCAGCCCACTTACGGGGAGATGACTCTGGAGGATTTCTTGATTAAAGCAGGGGTAGTTCGGGAACCAAATCCTATGCCCGCTCAGTACGGGCTGTACCCTCATAACAAACCCGCAACGGGACCGACTTTCATCGGATACGCCGGAAATGGCAAGAGGGATGCTTCCGGGTATCCTCCTCCTGGGGTCTGCTACGGTGGCGGTGGGTACGGTGTGGCGCCGGTGAGCCCTGTGTCATCATCGGATGGGATGGCGGCGAGGGAGAACGCCGGCGGAGGACAGTACGGGATGGAGATGGGGATGGTGAGAGGAAGAAAGAGGATCATGGAGGGACCAGTGGAGAAGTTAGTGGAGAGGAGACAGAGAAGGATGATTAAGAACAGAGAATCAGCAGCAAGGTCCAGAGCCAGAAAACAGGCATACACCGTCGAGTTGGAAGCAGAACTGAACCAGCTAAGGAATGAGAATGCCCAGCTCAAACTTGCTCTGGTTGAGCTCGAGAGGAGAAGAAAGCGGCAGTGTCTGGAGGAACTGAAGAATAACGACTCGAGGAAGGGTCAGACCAAATCTCAAAAGGCACAACACAAATTGAGAGCTCTGAGAAGGAACCAAAGTTGTCATTTGTGA 1029 0.5141 MVVAEGEVDSSLKSDQTLKNQAMSSLGRQSSIYALTLDEFQHRLCEEGKNFGSMNMDEFLSSIWNVEENQTINNSNSDDKGARKQPSLSRQGSLTIPTPLSRKTVDQVWSEIHNQTTYNNGDANNNVRNSESAPRQPTYGEMTLEDFLIKAGVVREPNPMPAQYGLYPHNKPATGPTFIGYAGNGKRDASGYPPPGVCYGGGGYGVAPVSPVSSSDGMAARENAGGGQYGMEMGMVRGRKRIMEGPVEKLVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLRNENAQLKLALVELERRRKRQCLEELKNNDSRKGQTKSQKAQHKLRALRRNQSCHL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2964 342 MobiDBLite consensus disorder prediction 115 137 - -
Prci1g2964 342 SUPERFAMILY Leucine zipper domain 253 296 IPR046347 GO:0003700|GO:0006355
Prci1g2964 342 MobiDBLite consensus disorder prediction 311 342 - -
Prci1g2964 342 Pfam bZIP transcription factor 253 303 IPR004827 GO:0003700|GO:0006355
Prci1g2964 342 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 303 IPR004827 GO:0003700|GO:0006355
Prci1g2964 342 MobiDBLite consensus disorder prediction 71 101 - -
Prci1g2964 342 MobiDBLite consensus disorder prediction 115 139 - -
Prci1g2964 342 FunFam BZIP transcription factor 251 301 - -
Prci1g2964 342 Coils Coil 269 315 - -
Prci1g2964 342 CDD bZIP_plant_BZIP46 253 300 - -
Prci1g2964 342 MobiDBLite consensus disorder prediction 324 342 - -
Prci1g2964 342 SMART brlzneu 249 311 IPR004827 GO:0003700|GO:0006355
Prci1g2964 342 Gene3D - 251 302 - -
Prci1g2964 342 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 321 IPR043452 GO:0003700|GO:0045893
Prci1g2964 342 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2964 Prci-Chr1 48320543 48323164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2964 2 308 bZIP Transcription Factor Family AT2G36270 47.912 1.12e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g2964 bZIP_1 7.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2964 K14432 - qsa:O6P43_005935 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2964 1 48320543 48323164 Prci3g2878 3 40503948 40507907 CCT
Prci1g2964 1 48320543 48323164 Prci1g2964 1 48320543 48323164 ECH