Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2951 ATGGCGGAAGAGCACCGATGCCAAACACCCGAAGGCCACCGGCTTTGCGCTAACAACTGTGGCTTTTTCGGAAGTCCGGCCACCATGAATCTCTGTTCCAAATGCTACAGAGATTTCTGTCTCAAGGAACAGCAGCAAGCCTCTACGAAAGCAACCATCGAAACCGCTCTCTCATCGTCATCCGCCCCTGCGCCTTCGCTGGCCACGGAGGCCCTCCCTCCTGCGCAGGCATCGAAAGCGCCGGATGTTGCGGTGGACGCGTTGATCTCGGCGCCGGCAGCCGCCGTAGAAGTTGGCACGGTGGCACAACCAAACCGATGCGCGACGTGTCGCAAAAGGGTCGGGTTGACCGGGTTCAAGTGCAAGTGCGGGATCACGTTTTGTGGCGTCCACAGGTATGCGGAGAAGCACGGGTGTAGCTTCGATTTCAAGGTGGTGGGCCGAGAGGAAATAAGTCGAGCGAATCCTGTCGTCATCGCTGAGAAGCTGCACAAGATTTAA 501 0.5768 MAEEHRCQTPEGHRLCANNCGFFGSPATMNLCSKCYRDFCLKEQQQASTKATIETALSSSSAPAPSLATEALPPAQASKAPDVAVDALISAPAAAVEVGTVAQPNRCATCRKRVGLTGFKCKCGITFCGVHRYAEKHGCSFDFKVVGREEISRANPVVIAEKLHKI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2951 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Prci1g2951 166 Gene3D - 1 64 - -
Prci1g2951 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Prci1g2951 166 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Prci1g2951 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Prci1g2951 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 166 - -
Prci1g2951 166 FunFam Zinc finger AN1-type containing 6 85 162 - -
Prci1g2951 166 SUPERFAMILY AN1-like Zinc finger 101 161 IPR035896 -
Prci1g2951 166 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Prci1g2951 166 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Prci1g2951 166 Gene3D - 88 161 IPR035896 -
Prci1g2951 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2951 Prci-Chr1 48208018 48209405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2951 1 166 C2H2 Transcription Factor Family AT3G52800 58.140 1.71e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2951 - - mdm:103433250 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2951 1 48208018 48209405 Prci1g2951 1 48208018 48209405 ECH