Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2935 ATGGACTTCCATCTGAAGCAATGGAAAAACCAGCACGAGCCTGAATCGGAAGAACGCCATTGTACAAAGATGCCGAGACTCATGCTCGAATCCCATCTACACCCACCATCCCCCTCTCCCCCTGCTCTTCCTCTCTTCGTACCCGAACTCCACACCAAAGTCGGCTCCCTCTCCGCATTTTCTGATTCCTCATTATCCTCGGCCAGATTTCCGAGGATGGGAAGTTATTTCAGTGTGGCTCAGTGGCAGGAGCTGGAGTTGCAGGCGCTGATATTCAGGTACATGTTGGCGGGTGCTGCTGTTCCCCCTGAGCTTCTCTTGCCAATTAAGAAGAGCCTTCTTCGTTCCGCTCCTTACTTCCTCCAGTATCAGCCTTCTCTGTTGCAATCGGGATACTGGGGAGGAGCTACCATGGATCCAGAGCCTGGCCGCTGTCGAAGGACTGACGGCAAGAAATGGCGGTGCTCGAGAGATGTGGTGGCGGGCCAGAAGTACTGTGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAAGTACCCACACCAGCCACTGCGGGAGGTGTTGGTTCTGCCACTGCCGGTGGCGGCGTTGGTTGTCCCCCTGCTACAACAGCCTCTGTATCTGCCCCGCACGTGACAACGTCATCATTGAGATCCCCTTTCGACCTCCTTCAGCTGAAACGATGTTCATCTGGGACCATCAAGAATGAAAAGGAGGGCATGTTTGAAAACCAGAGCCGAGATGACGTGGATTGTGAAGGTAGATCAGATGGGCATATTCTGCGACATTTTTTTGATGATTGGCCACGATCACTTCAGGAACGTGACAACGCCGAAAGCAACGCTAGCACCATCAACTCGGCCACATGCCTCTCTATTTCAATGCCCGGAAATGCTTCGTCGGACGTGTCACTGAAATTGTCTACAGGCGATGATACAGAGGATCCGTGTTCCAGAAGTGGAAATGTGGGCCCACAACATTTGCAATTAAACTGGGCAGGAGGATGGACTTCTTCGGCTAATCATGTGGCTCCAATGGGAGGACCACTCGCTGAGGTTCTCAGATCATCTACCACAACGTCTTCACCTACAAGCGTCCTGCACCAGTTGCCTCGTGGTTCTGCTTCTGAAACCAGTTTCATTAGCACCTAG 1164 0.5275 MDFHLKQWKNQHEPESEERHCTKMPRLMLESHLHPPSPSPPALPLFVPELHTKVGSLSAFSDSSLSSARFPRMGSYFSVAQWQELELQALIFRYMLAGAAVPPELLLPIKKSLLRSAPYFLQYQPSLLQSGYWGGATMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVEVPTPATAGGVGSATAGGGVGCPPATTASVSAPHVTTSSLRSPFDLLQLKRCSSGTIKNEKEGMFENQSRDDVDCEGRSDGHILRHFFDDWPRSLQERDNAESNASTINSATCLSISMPGNASSDVSLKLSTGDDTEDPCSRSGNVGPQHLQLNWAGGWTSSANHVAPMGGPLAEVLRSSTTTSSPTSVLHQLPRGSASETSFIST 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2935 387 MobiDBLite consensus disorder prediction 173 201 - -
Prci1g2935 387 SMART QLQ_2 75 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci1g2935 387 ProSiteProfiles WRC domain profile. 139 183 IPR014977 -
Prci1g2935 387 ProSiteProfiles QLQ domain profile. 76 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci1g2935 387 Pfam QLQ 77 109 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci1g2935 387 MobiDBLite consensus disorder prediction 306 325 - -
Prci1g2935 387 MobiDBLite consensus disorder prediction 359 387 - -
Prci1g2935 387 PANTHER GROWTH-REGULATING FACTOR 5 51 306 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci1g2935 387 Pfam WRC 140 182 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2935 Prci-Chr1 48043938 48046125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2935 1 374 GRF Transcription Factor Family AT3G52910 49.367 7.77e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci1g2935 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2935 - - qlo:115953466 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2935 1 48043938 48046125 Prci3g2900 3 40679153 40681956 CCT
Prci1g2935 1 48043938 48046125 Prci1g2935 1 48043938 48046125 ECH