Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2932 ATGATGAATAAGAAGCGAAGGGCAGGAAGGAAGAAGTTCCAAGAGACTCGTCATCCAACATACAAAGGCGTCAGGCAGAGAAACGGCAAGTGGGTGTGCGAGCTTCGACAACCTAACAACAACAAGGCGCGCTTGTGGCTCGGCACTTTTGCTAACCCTGACATGGCAGCCGTAGCCCATGATGTTGCTGCTCTTGCCTTCAAGGGCGATTCCGCATCCTTAAATTTCCCTGACGCTGCTCCCTCCTTGCCTCGCCTCAATCCGCTCACCTCCTCCCTCAGATCCATTCAGTTTGCCGCCATGGAAGCGGCTGGGAAGTTTCTTTGCGGCGACGATGCTGGGAAGAACATCTCTGCTCTGTCTTCGACCTGCAACCTTGAGTGCTCGGAAGCATTAGAGGAAGAAGGGGACGCGGAGGCGAGGAGCATGTATTGGGATGAAGAGGAGGTGTTTAACATGCCCGAACTCATGAACAGTATGGCAGAAGGGTTGATCATGACACCACCGGCCTTGCAGAGAGGCTTCAATTGGGATGACATCGAAACCACCACCGACTTGACTCTCTGGGAAGACTGA 576 0.5347 MMNKKRRAGRKKFQETRHPTYKGVRQRNGKWVCELRQPNNNKARLWLGTFANPDMAAVAHDVAALAFKGDSASLNFPDAAPSLPRLNPLTSSLRSIQFAAMEAAGKFLCGDDAGKNISALSSTCNLECSEALEEEGDAEARSMYWDEEEVFNMPELMNSMAEGLIMTPPALQRGFNWDDIETTTDLTLWED 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2932 191 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g2932 191 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Prci1g2932 191 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 190 IPR045277 GO:0003700
Prci1g2932 191 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Prci1g2932 191 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2932 Prci-Chr1 48002417 48004010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2932 5 189 AP2-EREBP Transcription Factor Family AT5G51990 45.745 1.46e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci1g2932 AP2 1.5e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2932 - - lja:Lj5g3v0712260.1 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2932 1 48002417 48004010 Prci1g2932 1 48002417 48004010 ECH