Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2920 ATGGAAATGCCCAGTAGGAGATCCAACTACACGCTGTTGAGCCAAGTCCCCGATGATCACTACGGCGGCGGAGCCGTGTCGTCGGGGACTGCTGCTCCCTCTTCGTTGTTTGGTTCTTCGTCTGGGGACGGCAAGAACATTAAAGGCAAGTTGGACAGAGGGTTTGATTGGGACTTGAGTACTGATCATAGAGTGACTCAGCAGGGGAACCGGATAGGAAATTTGTTTCCATCGATCGGGTTGCAGAGGCAGTCCAGTGAGAGCAGTTTTGGCGAAAGCTCGCTGTCAGGCGAGTATTATGCTCCGACTCCATCTACTGCAGCTGCAAATGAGATCGATGCCTTTGGGTATATGCATGATGATGGGGCCAGGATTGGTGGAGGCGCTGGTGTTGGGTCCGACTTAAGACCGAAGTTGACGGAAACTACGGTGCGAACAGCTGGGTCGTCTTCAGGAAAAAGCTGGGCGCAGCAGACGGAGGAGGGTTATCAATTACAGCTAGCTTTGGCGCTTCGGCTTTCATCCGATGCAACTTGTGCTGATGATCCCAATTTTCTGGATCCAGTCCCGGATGACTCTGTTTTGAGGTCGTCATCCTCGAGCTCTCCGGAGGCAGTGTCACATAGATTCTGGGTTAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGCTTTTACTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGTACTGATCTGCAGGAAAATGGCCGAATTCCATCTGTCGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAGCGTAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGCGCATGGTATTTCTTTTGGCTGTGTAACATCAAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCAAATGGGGGGTTCTGCATCTGTTGGGGAGGATGGCCTTCTTTCTACTTGGAGGGAGCGTAGTAACGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGTAGACATCGTGCTACATTATTCAAAGTGCTAGCTGACACTGTTGATTTACCATGTCGGATTGCAAAGGGCTGTAGATATTGCTCTAGAGATGATGCTTCCTCTTGCCTTGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTGCTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCCTCCATCTCATTTCCCTCACCCTTGTGCTTTCCAAGACTTAAACCAGCTGAACATACAATTGATTTCAGGTCACTGGCCAAGCAGTATTTCTCTGATTGTGTGTCCCTTGAGCTTTCTTTTGACAATAATTCTTCAGAACAGTTCGATGGAAAGTGCAAGGACAGATATGACCCCAGGTCAATTTCAATTTCAAAGGAAAGCAACAGAACAAAAGATCATGGTTCTGAAGCATTTAATTCATATAAACCTTCCCAGAACATTGCAGACTCTAAGACTTCGGGCAAGGCTCCATTGCCTATAAATCATAACCTACCTCCTGGTCATAGAGATATGATGAAGCCTTTGGTACGTACAAATCTAAATGTGGATGCTATTGAGGGTAGGTGGTTTGTCGGTGGTAGCCAATTGGTTCCTGGCAGACCAAACATAGAATTAGGCATTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGCGAATTGGATCAGGTTCGTTTGGAACTGTACATCGTGCTGAATGGAATGGCTCAGAGGTTGCTGTTAAAATTCTTATGGAACAAGATTTTCATGCTGAACGTGTCAAGGAATTTCTGAGGGAGGTTGCGATAATGAAGAGGTTGAGGCATCCAAACATTGTCTTATTGATGGGGGCAGTCACTCAGCCTCCAAACTTATCAATTGTCACAGAATACTTGTCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGTTGGATGAAAGGCGCAGACTCAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAACCCACCCATTGTTCACAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACCGTTAAGGTCTGTGATTTTGGGCTTTCCCGTCTAAAAGCAAACACATTTCTCTCATCAAAGTCTGCAGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCAAATGAGAAGTCTGATGTTTATAGCTTTGGCGTAATCTTGTGGGAGCTTGTGACATTGCAACAACCCTGGAGCAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACGTGATTTGAATCCTCAAGTAGCTGCAATAATTGAGGCTTGCTGGTCCAATGAGCCCTGGAAACGTCCTTCTTTTGAAAGTATCATGGATTCTTTGAGACCATTGATCAAACCCCCTACACCTCAACCTGGTCGCCCACCATTACTTTCCTGA 2553 0.4587 MEMPSRRSNYTLLSQVPDDHYGGGAVSSGTAAPSSLFGSSSGDGKNIKGKLDRGFDWDLSTDHRVTQQGNRIGNLFPSIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDAFGYMHDDGARIGGGAGVGSDLRPKLTETTVRTAGSSSGKSWAQQTEEGYQLQLALALRLSSDATCADDPNFLDPVPDDSVLRSSSSSSPEAVSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPCADSSLEVVLVDQRSDPSLKELQNRAHGISFGCVTSKEVVDQLAKLVCNQMGGSASVGEDGLLSTWRERSNDLKDCLGSVVVPIGSLSVGLCRHRATLFKVLADTVDLPCRIAKGCRYCSRDDASSCLVRFGLDREYLVDLIGKPGCLWEPDSLLNGPSSISFPSPLCFPRLKPAEHTIDFRSLAKQYFSDCVSLELSFDNNSSEQFDGKCKDRYDPRSISISKESNRTKDHGSEAFNSYKPSQNIADSKTSGKAPLPINHNLPPGHRDMMKPLVRTNLNVDAIEGRWFVGGSQLVPGRPNIELGIDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERVKEFLREVAIMKRLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELVTLQQPWSNLNPAQVVAAVGFKGKRPEIPRDLNPQVAAIIEACWSNEPWKRPSFESIMDSLRPLIKPPTPQPGRPPLLS 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2920 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Prci1g2920 850 ProSitePatterns Protein kinases ATP-binding region signature. 584 605 IPR017441 GO:0005524
Prci1g2920 850 MobiDBLite consensus disorder prediction 496 511 - -
Prci1g2920 850 MobiDBLite consensus disorder prediction 481 495 - -
Prci1g2920 850 CDD STKc_MAP3K-like 584 832 - -
Prci1g2920 850 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 181 835 - -
Prci1g2920 850 PRINTS Tyrosine kinase catalytic domain signature 652 665 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 PRINTS Tyrosine kinase catalytic domain signature 693 711 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 PRINTS Tyrosine kinase catalytic domain signature 740 750 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 PRINTS Tyrosine kinase catalytic domain signature 759 781 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 PRINTS Tyrosine kinase catalytic domain signature 803 825 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 SUPERFAMILY Protein kinase-like (PK-like) 564 831 IPR011009 -
Prci1g2920 850 MobiDBLite consensus disorder prediction 481 531 - -
Prci1g2920 850 Gene3D Transferase(Phosphotransferase) domain 1 657 841 - -
Prci1g2920 850 SMART serkin_6 578 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2920 850 FunFam Serine/threonine-protein kinase CTR1 657 842 - -
Prci1g2920 850 Pfam Ethylene-responsive protein kinase Le-CTR1 204 408 - -
Prci1g2920 850 Gene3D Phosphorylase Kinase; domain 1 571 656 - -
Prci1g2920 850 ProSiteProfiles Protein kinase domain profile. 578 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2920 850 Pfam Protein tyrosine and serine/threonine kinase 579 832 IPR001245 GO:0004672|GO:0006468
Prci1g2920 850 FunFam Serine/threonine-protein kinase isoform 1 568 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2920 Prci-Chr1 47849378 47859093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2920 1 845 MAP Kinase Kinase Kinase AT5G03730 67.828 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g2920 PK_Tyr_Ser-Thr 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2920 K14510 - qsa:O6P43_009518 1222.99