Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2919 ATGGAAATGCCCAGTAGGAGATCCAACTACACGCTGTTGAGCCAAGTCCCCGATGATCACTACGGCGGCGGAGCCGTGTCGTCGGGGACTGCTGCTCCCTCTTCGTTGTTTGGTTCTTCGTCTGGGGACGGCAAGAACATTAAAGGCAAGTTGGACAGAGGGTTTGATTGGGACTTGAGTACTGATCATAGAGTGACTCAGCAGGGGAACCGGATAGGAAATTTGTTTCCATCGATCGGGTTGCAGAGGCAGTCCAGTGAGAGCAGTTTTGGCGAAAGCTCGCTGTCAGGCGAGTATTATGCTCCGACTCCATCTACTGCAGCTGCAAATGAGATCGATGCCTTTGGGTATATGCATGATGATGGGGCCAGGATTGGTGGAGGCGCTGGTGTTGGGTCCGACTTAAGACCGAAGTTGACGGAAACTACGGTGCGAACAGCTGGGTCGTCTTCAGGAAAAAGCTGGGCGCAGCAGACGGAGGAGGGTTATCAATTACAGCTAGCTTTGGCGCTTCGGCTTTCATCCGATGCAACTTGTGCTGATGATCCCAATTTTCTGGATCCAGTCCCGGATGACTCTGTTTTGAGGTCGTCATCCTCGAGCTCTCCGGAGGCAGTGTCACATAGATTCTGGGTTAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGCTTTTACTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGTACTGATCTGCAGGAAAATGGCCGAATTCCATCTGTCGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAGCGTAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGCGCATGGTATTTCTTTTGGCTGTGTAACATCAAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCAAATGGGGGGTTCTGCATCTGTTGGGGAGGATGGCCTTCTTTCTACTTGGAGGGAGCGTAGTAACGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGTAGACATCGTGCTACATTATTCAAAGTGCTAGCTGACACTGTTGATTTACCATGTCGGATTGCAAAGGGCTGTAGATATTGCTCTAGAGATGATGCTTCCTCTTGCCTTGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTGCTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCCTCCATCTCATTTCCCTCACCCTTGTGCTTTCCAAGACTTAAACCAGCTGAACATACAATTGATTTCAGGTCACTGGCCAAGCAGTATTTCTCTGATTGTGTGTCCCTTGAGCTTTCTTTTGACAATAATTCTTCAGAACAGTTCGATGGAAAGTGCAAGGACAGATATGACCCCAGGTCAATTTCAATTTCAAAGGAAAGCAACAGAACAAAAGATCATGGTTCTGAAGCATTTAATTCATATAAACCTTCCCAGAACATTGCAGACTCTAAGACTTCGGGCAAGGCTCCATTGCCTATAAATCATAACCTACCTCCTGGTCATAGAGATATGATGAAGCCTTTGGTACGTACAAATCTAAATGTGGATGCTATTGAGGGTAGGTGGTTTGTCGGTGGTAGCCAATTGGTTCCTGGCAGACCAAACATAGAATTAGGCATTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGCGAATTGGATCAGGTTCGTTTGGAACTGTACATCGTGCTGAATGGAATGGCTCAGAGGTTGCTGTTAAAATTCTTATGGAACAAGATTTTCATGCTGAACGTGTCAAGGAATTTCTGAGGGAGGTTGCGATAATGAAGAGGTTGAGGCATCCAAACATTGTCTTATTGATGGGGGCAGTCACTCAGCCTCCAAACTTATCAATTGTCACAGAATACTTGTCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGTTGGATGAAAGGCGCAGACTCAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAACCCACCCATTGTTCACAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACCGTTAAGATCATAAGATGA 2166 0.4561 MEMPSRRSNYTLLSQVPDDHYGGGAVSSGTAAPSSLFGSSSGDGKNIKGKLDRGFDWDLSTDHRVTQQGNRIGNLFPSIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDAFGYMHDDGARIGGGAGVGSDLRPKLTETTVRTAGSSSGKSWAQQTEEGYQLQLALALRLSSDATCADDPNFLDPVPDDSVLRSSSSSSPEAVSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPCADSSLEVVLVDQRSDPSLKELQNRAHGISFGCVTSKEVVDQLAKLVCNQMGGSASVGEDGLLSTWRERSNDLKDCLGSVVVPIGSLSVGLCRHRATLFKVLADTVDLPCRIAKGCRYCSRDDASSCLVRFGLDREYLVDLIGKPGCLWEPDSLLNGPSSISFPSPLCFPRLKPAEHTIDFRSLAKQYFSDCVSLELSFDNNSSEQFDGKCKDRYDPRSISISKESNRTKDHGSEAFNSYKPSQNIADSKTSGKAPLPINHNLPPGHRDMMKPLVRTNLNVDAIEGRWFVGGSQLVPGRPNIELGIDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERVKEFLREVAIMKRLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKIIR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2919 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Prci1g2919 721 ProSitePatterns Protein kinases ATP-binding region signature. 584 605 IPR017441 GO:0005524
Prci1g2919 721 SUPERFAMILY Protein kinase-like (PK-like) 566 720 IPR011009 -
Prci1g2919 721 MobiDBLite consensus disorder prediction 496 511 - -
Prci1g2919 721 MobiDBLite consensus disorder prediction 481 495 - -
Prci1g2919 721 SMART serkin_6 578 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2919 721 MobiDBLite consensus disorder prediction 481 531 - -
Prci1g2919 721 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 181 720 - -
Prci1g2919 721 Pfam Ethylene-responsive protein kinase Le-CTR1 204 408 - -
Prci1g2919 721 Pfam Protein tyrosine and serine/threonine kinase 579 719 IPR001245 GO:0004672|GO:0006468
Prci1g2919 721 Gene3D Transferase(Phosphotransferase) domain 1 657 721 - -
Prci1g2919 721 Gene3D Phosphorylase Kinase; domain 1 571 656 - -
Prci1g2919 721 ProSiteProfiles Protein kinase domain profile. 578 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2919 721 FunFam Serine/threonine-protein kinase isoform 1 568 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2919 Prci-Chr1 47849376 47856843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2919 1 719 MAP Kinase Kinase Kinase AT5G03730 64.130 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g2919 EDR1 9.2e-82 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2919 K14510 - qsa:O6P43_009518 999.193