Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2918 ATGGAAATGCCCAGTAGGAGATCCAACTACACGCTGTTGAGCCAAGTCCCCGATGATCACTACGGCGGCGGAGCCGTGTCGTCGGGGACTGCTGCTCCCTCTTCGTTGTTTGGTTCTTCGTCTGGGGACGGCAAGAACATTAAAGGCAAGTTGGACAGAGGGTTTGATTGGGACTTGAGTACTGATCATAGAGTGACTCAGCAGGGGAACCGGATAGGAAATTTGTTTCCATCGATCGGGTTGCAGAGGCAGTCCAGTGAGAGCAGTTTTGGCGAAAGCTCGCTGTCAGGCGAGTATTATGCTCCGACTCCATCTACTGCAGCTGCAAATGAGATCGATGCCTTTGGGTATATGCATGATGATGGGGCCAGGATTGGTGGAGGCGCTGGTGTTGGGTCCGACTTAAGACCGAAGTTGACGGAAACTACGGTGCGAACAGCTGGGTCGTCTTCAGGAAAAAGCTGGGCGCAGCAGACGGAGGAGGGTTATCAATTACAGCTAGCTTTGGCGCTTCGGCTTTCATCCGATGCAACTTGTGCTGATGATCCCAATTTTCTGGATCCAGTCCCGGATGACTCTGTTTTGAGGTCGTCATCCTCGAGCTCTCCGGAGGCAGTGTCACATAGATTCTGGGTTAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGCTTTTACTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGTACTGATCTGCAGGAAAATGGCCGAATTCCATCTGTCGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAGCGTAGTGATCCCAGCTTAAAGGAATTGCAAAATAGAGCGCATGGTATTTCTTTTGGCTGTGTAACATCAAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCAAATGGGGGGTTCTGCATCTGTTGGGGAGGATGGCCTTCTTTCTACTTGGAGGGAGCGTAGTAACGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCCTCTGTAGACATCGTGCTACATTATTCAAAGTGCTAGCTGACACTGTTGATTTACCATGTCGGATTGCAAAGGGCTGTAGATATTGCTCTAGAGATGATGCTTCCTCTTGCCTTGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTTGCTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCCTCCATCTCATTTCCCTCACCCTTGTGCTTTCCAAGACTTAAACCAGCTGAACATACAATTGATTTCAGGTCACTGGCCAAGCAGTATTTCTCTGATTGTGTGTCCCTTGAGCTTTCTTTTGACAATAATTCTTCAGAACAGTTCGATGGAAAGTGCAAGGACAGATATGACCCCAGGTCAATTTCAATTTCAAAGGAAAGCAACAGAACAAAAGATCATGGTTCTGAAGCATTTAATTCATATAAACCTTCCCAGAACATTGCAGACTCTAAGACTTCGGGCAAGGCTCCATTGCCTATAAATCATAACCTACCTCCTGGTCATAGAGATATGATGAAGCCTTTGGTACGTACAAATCTAAATGTGGATGCTATTGAGGGTAGGTGGTTTGTCGGTGGTAGCCAATTGGTTCCTGGCAGACCAAACATAGAATTAGGCATTGATATGGAGGATTTGGACATACCATGGAGTGATCTTGTTTTAAAAGAGCGAATTGGATCAGGTTCGTTTGGAACTGTACATCGTGCTGAATGGAATGGCTCAGAGGTTGCTGTTAAAATTCTTATGGAACAAGATTTTCATGCTGAACGTGTCAAGGAATTTCTGAGGGAGGTTGCGATAATGAAGAGGTTGAGGCATCCAAACATTGTCTTATTGATGGGGGCAGTCACTCAGCCTCCAAACTTATCAATTGTCACAGAATACTTGTCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGTTGGATGAAAGGCGCAGACTCAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCATAAACGTAACCCACCCATTGTTCACAGAGATTTGAAGTCTCCAAATCTTCTTGTTGACAAGAAATATACCGTTAAGGTCTGTGATTTTGGGCTTTCCCGTCTAAAAGCAAACACATTTCTCTCATCAAAGTCTGCAGCTGGGACTTATGATACATTTAATTTCTCTCCTTTGATCCCATAG 2259 0.4546 MEMPSRRSNYTLLSQVPDDHYGGGAVSSGTAAPSSLFGSSSGDGKNIKGKLDRGFDWDLSTDHRVTQQGNRIGNLFPSIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDAFGYMHDDGARIGGGAGVGSDLRPKLTETTVRTAGSSSGKSWAQQTEEGYQLQLALALRLSSDATCADDPNFLDPVPDDSVLRSSSSSSPEAVSHRFWVNGCLSYSDKIPDGFYLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPCADSSLEVVLVDQRSDPSLKELQNRAHGISFGCVTSKEVVDQLAKLVCNQMGGSASVGEDGLLSTWRERSNDLKDCLGSVVVPIGSLSVGLCRHRATLFKVLADTVDLPCRIAKGCRYCSRDDASSCLVRFGLDREYLVDLIGKPGCLWEPDSLLNGPSSISFPSPLCFPRLKPAEHTIDFRSLAKQYFSDCVSLELSFDNNSSEQFDGKCKDRYDPRSISISKESNRTKDHGSEAFNSYKPSQNIADSKTSGKAPLPINHNLPPGHRDMMKPLVRTNLNVDAIEGRWFVGGSQLVPGRPNIELGIDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERVKEFLREVAIMKRLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTYDTFNFSPLIP 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2918 752 Gene3D Phosphorylase Kinase; domain 1 571 656 - -
Prci1g2918 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Prci1g2918 752 ProSitePatterns Protein kinases ATP-binding region signature. 584 605 IPR017441 GO:0005524
Prci1g2918 752 SUPERFAMILY Protein kinase-like (PK-like) 566 741 IPR011009 -
Prci1g2918 752 Pfam Protein tyrosine and serine/threonine kinase 579 730 IPR001245 GO:0004672|GO:0006468
Prci1g2918 752 MobiDBLite consensus disorder prediction 496 511 - -
Prci1g2918 752 ProSiteProfiles Protein kinase domain profile. 578 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2918 752 MobiDBLite consensus disorder prediction 481 495 - -
Prci1g2918 752 SMART serkin_6 578 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2918 752 FunFam Serine/threonine-protein kinase isoform 1 568 656 - -
Prci1g2918 752 Gene3D Transferase(Phosphotransferase) domain 1 657 746 - -
Prci1g2918 752 MobiDBLite consensus disorder prediction 481 531 - -
Prci1g2918 752 Pfam Ethylene-responsive protein kinase Le-CTR1 204 408 - -
Prci1g2918 752 CDD STKc_MAP3K-like 584 742 - -
Prci1g2918 752 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 181 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2918 Prci-Chr1 47849376 47857408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2918 1 741 MAP Kinase Kinase Kinase AT5G03730 65.172 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Prci1g2918 EDR1 9.9e-82 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2918 K14510 - qsa:O6P43_009518 1041.95