Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2913 ATGGCGTTTTGGGGTTTCGAGTTGAAAAATGGAGAATCTCTCAAGGTTACCCCAGGAGAAGACATGATCTTGCATCTTACACAGGCATGTCTGGGAATCAAGCAGGGAAAAGAGAGTGAACCAGTTTGCCTATTTGTGAAAGTTGGTGATCAAAAGCTTGGGATTGGAATTCTTTCAAGTGAAAAGCTCCCTCAAATATCACTTAACTTGGTGTTTGAAAAGGACTTTGAGCTCTCCCACAGCTGGAAACATGGAAGTGTCTTCTTTACCGGATATAGAGCAAGAAGTTTAGTTGATGAGGAAGTGACTGATAGTTCTGATTATGAAGATGATGATATTCCAATTAGAGCTGCCAATGGAGAACCTGAATCTAAAGTGATGGAAGCTGTGCGACTTGTTGCAGTTGAAGCTGGCCTGACAGGAAAGATGAGGGGTAGAAGAAAGGATGGAAACGGTCAAGATGAGGAAGATTCGTCCGAATTTGATGAGTCGGATGAGGATTCTGGTAAAGATGAGCCCACTGAGAATGGCGGTGAGGCAGGAAGCGAAGATGGAGATGATATTGATGAGGGAGACAATGAAAGTGAGGATAAAGAGACACCCGAAAAGCCCGAAGCTGGCATCAAGAGGCCTGCCAAATCTTCCAAGAAAACACCTGTTCCAGAGAAGATGGCAAAATTAGTTACTCCACATAAGACTGATGGCAAAAAGGGGGGCCATGTCCACATTGCGACTCCTTACCCCTCTAAGCAGGCTGGGAAGGTGGTTCCGACCAACGCGGCGCAGGCGAAGGAGACTCACGAATCGACTGCAGAGTACAGCTGCAAGCCTTGCAACAGGTTATTTAAGACAGAAAATGGATTACAGTCTCATAATAGGGCCAAGCACAGTGCCTAA 897 0.4571 MAFWGFELKNGESLKVTPGEDMILHLTQACLGIKQGKESEPVCLFVKVGDQKLGIGILSSEKLPQISLNLVFEKDFELSHSWKHGSVFFTGYRARSLVDEEVTDSSDYEDDDIPIRAANGEPESKVMEAVRLVAVEAGLTGKMRGRRKDGNGQDEEDSSEFDESDEDSGKDEPTENGGEAGSEDGDDIDEGDNESEDKETPEKPEAGIKRPAKSSKKTPVPEKMAKLVTPHKTDGKKGGHVHIATPYPSKQAGKVVPTNAAQAKETHESTAEYSCKPCNRLFKTENGLQSHNRAKHSA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2913 298 ProSiteProfiles Zinc finger C2H2 type domain profile. 273 298 IPR013087 -
Prci1g2913 298 Gene3D Nucleoplasmin core domain 1 96 - -
Prci1g2913 298 MobiDBLite consensus disorder prediction 197 220 - -
Prci1g2913 298 ProSitePatterns Zinc finger C2H2 type domain signature. 275 296 IPR013087 -
Prci1g2913 298 MobiDBLite consensus disorder prediction 155 170 - -
Prci1g2913 298 MobiDBLite consensus disorder prediction 143 255 - -
Prci1g2913 298 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
Prci1g2913 298 MobiDBLite consensus disorder prediction 178 196 - -
Prci1g2913 298 FunFam Histone deacetylase HDT1 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2913 Prci-Chr1 47790554 47794410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2913 1 113 C2H2 Transcription Factor Family AT5G03740 46.903 1.84e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2913 - - gmx:100812152 287.345