Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2912 ATGAATTCATCGCAGAGCCAATTTTTTGTGCCTTTTTCTTGGGGGAAAAACAAAACACATTTGTTGTGGTGTTTCGAGTTGAAAAATGGAGAATCTCTCAAGGTTACCCCAGGAGAAGACATGATCTTGCATCTTACACAGGCATGTCTGGGAATCAAGCAGGGAAAAGAGAGTGAACCAGTTTGCCTATTTGTGAAAGTTGGTGATCAAAAGCTTGGGATTGGAATTCTTTCAAGTGAAAAGCTCCCTCAAATATCACTTAACTTGGTGTTTGAAAAGGACTTTGAGCTCTCCCACAGCTGGAAACATGGAAGTGTCTTCTTTACCGGATATAGAGCAAGAAGTTTAGTTGATGAGGAAGTGACTGATAGTTCTGATTATGAAGATGATGATATTCCAATTAGAGCTGCCAATGGAGAACCTGAATCTAAAGTGATGGAAGCTGTGCGACTTGTTGCAGTTGAAGCTGGCCTGACAGGAAAGATGAGGGGTAGAAGAAAGGATGGAAACGGTCAAGATGAGGAAGATTCGTCCGAATTTGATGAGTCGGATGAGGATTCTGGTAAAGATGAGCCCACTGAGAATGGCGGTGAGGCAGGAAGCGAAGATGGAGATGATATTGATGAGGGAGACAATGAAAGTGAGGATAAAGAGACACCCGAAAAGCCCGAAGCTGGCATCAAGAGGCCTGCCAAATCTTCCAAGAAAACACCTGTTCCAGAGAAGATGGCAAAATTAGTTACTCCACATAAGACTGATGGCAAAAAGGGGGGCCATGTCCACATTGCGACTCCTTACCCCTCTAAGCAGGCTGGGAAGGTGGTTCCGACCAACGCGGCGCAGGCGAAGGAGACTCACGAATCGACTGCAGAGTACAGCTGCAAGCCTTGCAACAGGTTATTTAAGACAGAAAATGGATTACAGTCTCATAATAGGGCCAAGCACAGTGCCTAA 954 0.4497 MNSSQSQFFVPFSWGKNKTHLLWCFELKNGESLKVTPGEDMILHLTQACLGIKQGKESEPVCLFVKVGDQKLGIGILSSEKLPQISLNLVFEKDFELSHSWKHGSVFFTGYRARSLVDEEVTDSSDYEDDDIPIRAANGEPESKVMEAVRLVAVEAGLTGKMRGRRKDGNGQDEEDSSEFDESDEDSGKDEPTENGGEAGSEDGDDIDEGDNESEDKETPEKPEAGIKRPAKSSKKTPVPEKMAKLVTPHKTDGKKGGHVHIATPYPSKQAGKVVPTNAAQAKETHESTAEYSCKPCNRLFKTENGLQSHNRAKHSA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2912 317 ProSiteProfiles Zinc finger C2H2 type domain profile. 292 317 IPR013087 -
Prci1g2912 317 FunFam Histone deacetylase HDT1 21 116 - -
Prci1g2912 317 Pfam Nucleoplasmin-like domain 22 111 IPR041232 -
Prci1g2912 317 Gene3D Nucleoplasmin core domain 16 115 - -
Prci1g2912 317 MobiDBLite consensus disorder prediction 162 274 - -
Prci1g2912 317 MobiDBLite consensus disorder prediction 174 189 - -
Prci1g2912 317 MobiDBLite consensus disorder prediction 197 215 - -
Prci1g2912 317 MobiDBLite consensus disorder prediction 216 239 - -
Prci1g2912 317 ProSitePatterns Zinc finger C2H2 type domain signature. 294 315 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2912 Prci-Chr1 47790553 47793589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2912 22 143 C2H2 Transcription Factor Family AT5G03740 42.623 1.63e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2912 - - gmx:100812152 280.026