Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2911 ATGTTCTCTACTACTATAAAGTTACGTCCTGAGACAGGTTCAATCTATCGTTTTGGCTTCAATTTTATTAATATTCCAGATATTGCAGATAGGGAGGCAACGAATGGTAATTACTTGATTGATGTGATTGGAAGATTATTTGGAATTGGAGAGTTGGAGGAACCGATTAAGGATGGGAAAAAACAAAAACGAATAGAAATAAGCCTAGAAGATGCAAAGAAAAACAAGGTGAGTTGTAATTTATGGGGAGCCTTTGCTGATGATGTACTAAACTTGATAGAGGAGGCACTAAAAAAGCCAGTTATTATCATATTGCAGTGGTTTAAGATTAGAGAGTTCAATAAAATGAGGAGGCTTACTAGCACAATGTATTGCTTGCGAGTTTTTGTACACTCTTCAATTCCAGAGGTCTCCAGTTTTATTTCTAGTCTTGAGGCTTCAGGTAATCACTTGGATGAAGACATAGAGCTATTGACTAGCCAAAATTCTCAATCTATTGGTGAATCTTTGCTCGTAATACCAAATAAGGTTAAGATTGAAGAACTATCAGATTGTAAACATGAGGATGAAGTTGTGACTCTTGGCACTGTTGTCGATATTTATACTGATAGAGATTGGTTCTACAATGCATGCAAGAAATGTAATAAGGGAGTACTCCTTGATTGTGATGGGTTCTATTGCACAGAGTGCAATAGAAAAGTCAAGACTGTTGTACCAAGGTTTAAGGTGACATTTACTGCAGCTGATGGTACTGGATCTGACACATTCATTATGTTTGATCCTGTATTTTCTAAGTTTGTAAATTGCACTGCTGCTCACCTAAGAGAGTCTATTCCTAAGGAATCTGAAGATGAGTTTGTGCTTCCAGATTATTTTTATGAGTTTATTGGGAAGGAGTTTGTGTTCAAGGTTTCCATTAGAGACCCCGCGAAACAAGGCTTCTCGGCTGGCTACATAGTGACCCGTCTTTGTGAAGATTCAAATGTATTAAGAGCATATAAGGAAGGCATAGATGACCTTCCAAATAGTCTACACAATGACAGTCATACTGAAACCACAACTGAATGTGATACTTCGCATGTAGACTCAGAAGTTGGTAATACAGGTGAAAGCACTCCTTCAAAAAGTATTAGCTCTAAAACATGCCCAAAGTTAAGTGAGAAATATGCTAATAGTGGTGATTTTTCCACGAATGTGAATAAGATGCGTGCCCTTCCAATTGGTGCCTCAATAAAGGGAAAAAATATGTGTGACATGACTGTCGATAATGATAGTAGTGATGATGAACTTATTTCATCGGTTGTGAAGCGTGTAAAGATAGAGAAATGA 1329 0.3725 MFSTTIKLRPETGSIYRFGFNFINIPDIADREATNGNYLIDVIGRLFGIGELEEPIKDGKKQKRIEISLEDAKKNKVSCNLWGAFADDVLNLIEEALKKPVIIILQWFKIREFNKMRRLTSTMYCLRVFVHSSIPEVSSFISSLEASGNHLDEDIELLTSQNSQSIGESLLVIPNKVKIEELSDCKHEDEVVTLGTVVDIYTDRDWFYNACKKCNKGVLLDCDGFYCTECNRKVKTVVPRFKVTFTAADGTGSDTFIMFDPVFSKFVNCTAAHLRESIPKESEDEFVLPDYFYEFIGKEFVFKVSIRDPAKQGFSAGYIVTRLCEDSNVLRAYKEGIDDLPNSLHNDSHTETTTECDTSHVDSEVGNTGESTPSKSISSKTCPKLSEKYANSGDFSTNVNKMRALPIGASIKGKNMCDMTVDNDSSDDELISSVVKRVKIEK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2911 442 PANTHER OS03G0429900 PROTEIN 66 368 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Prci1g2911 442 SUPERFAMILY Nucleic acid-binding proteins 183 307 IPR012340 -
Prci1g2911 442 CDD RPA1_DBD_B_like 41 144 - -
Prci1g2911 442 Gene3D - 15 152 IPR012340 -
Prci1g2911 442 MobiDBLite consensus disorder prediction 359 380 - -
Prci1g2911 442 Pfam Replication factor-A C terminal domain 194 307 IPR013955 -
Prci1g2911 442 SUPERFAMILY Nucleic acid-binding proteins 20 151 IPR012340 -
Prci1g2911 442 MobiDBLite consensus disorder prediction 341 358 - -
Prci1g2911 442 CDD RPA1_DBD_C 179 306 IPR047192 -
Prci1g2911 442 MobiDBLite consensus disorder prediction 341 380 - -
Prci1g2911 442 Gene3D - 159 327 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2911 Prci-Chr1 47784626 47786973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2911 20 306 Core DNA Replication Machinery Family AT5G08020 24.916 9.43e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2911 - - pcin:129302135 889.026