Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2904 ATGCAGAGTACTCTAATGGAAGAAAGCGTGTCGGGCTCAACCCCACAACCTATTGCTGTATCCCTGCCTCAGGTGACCAAGATGGACGTGGTGAACAGTGCAGGGGCAATAGTGGTTGCAGAACCCGTTACAACGCCGGTGAGCGGAGGCCAAGGCAGCTTTGATTTGTCTGGGAAAAAGAAGAGGGGAAGGCCCAGAAAATATGACTCCGATGGAAACTTGACGACATCGTATCAGCAACGGTCTGCCTCTCCCTTCTCTTTATCCTCCAAAAGGGGTCGACCTAAGCCTCTTCCCCACCTTTTCGCATCCTTCGGTGGGTTTTTTGCAAACACAGCTGGCGGGGATTTTACACCTCATGTGGTGACTGTTCGTACCGGAGAGGATGTTGCAGGAAAAATTCTTGCATTCGCCCAGAACGGTCCCAGAGGAATATGCATTCTTTCTGCCAATGGAGCTATCTCTAATGTCACAATGCGCCAACCTGGCTCTTCCGGTGGCTTCTTGACTTACGAGGGTCGATTTGAGATTTTATCTCTGTCTGGGTCATTCACAATGAACGACAATGGCAGTGGCATGACAAGTCGGACTGGTGGGTTGAGTGTCTCACTAGCTGGCCCTGATGGACGTGTCATAGGAGGTGGAGTTGCAGGTTTATTGACAGCTGCTAGCCCAATCCAGATTGTGATGGGCAGCTTCATGTCAAATGGTTTTTACCATAAGAAATATAAAAAGAAGCAGCAACCTAATTCAGGTGGTCCAGATACGGGGATGGCAGGTAGGCCGGTCTCACATGAAAATCTTAATGGTGAAGCCTTCTTGAAACCAACGTCTCAGATACCAGAACAAGGCCAGAGAGAATCCGAGGTTGTCACTATTGATGAACAGAACTTGGATGCTACACCCAATGAGCACTTGAACGGTTCTCAACATTTGTCGGATCACAGGCCGCACCCAGACATCAATATATCTCTGCCTGCACAATAG 987 0.4914 MQSTLMEESVSGSTPQPIAVSLPQVTKMDVVNSAGAIVVAEPVTTPVSGGQGSFDLSGKKKRGRPRKYDSDGNLTTSYQQRSASPFSLSSKRGRPKPLPHLFASFGGFFANTAGGDFTPHVVTVRTGEDVAGKILAFAQNGPRGICILSANGAISNVTMRQPGSSGGFLTYEGRFEILSLSGSFTMNDNGSGMTSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMSNGFYHKKYKKKQQPNSGGPDTGMAGRPVSHENLNGEAFLKPTSQIPEQGQRESEVVTIDEQNLDATPNEHLNGSQHLSDHRPHPDINISLPAQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2904 328 Gene3D - 119 251 - -
Prci1g2904 328 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 35 295 IPR039605 GO:0003680
Prci1g2904 328 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 241 - -
Prci1g2904 328 MobiDBLite consensus disorder prediction 244 328 - -
Prci1g2904 328 MobiDBLite consensus disorder prediction 294 308 - -
Prci1g2904 328 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 233 IPR005175 -
Prci1g2904 328 CDD DUF296 118 233 IPR005175 -
Prci1g2904 328 MobiDBLite consensus disorder prediction 271 287 - -
Prci1g2904 328 ProSiteProfiles PPC domain profile profile. 114 255 IPR005175 -
Prci1g2904 328 MobiDBLite consensus disorder prediction 47 92 - -
Prci1g2904 328 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2904 Prci-Chr1 47712564 47714895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2904 59 247 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.189 6.45e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2904 - - gmx:100779227 359.377