Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2900 ATGGCCTCCTGCGACGACGACGACTTCTCCCTCCTCAGTGACGATCACCACCAGTCGAGCTCTGGCCCGCATCACCATCTTCACCAGACCTACGCACCTCATTCTTTCTCCTCCGCCGTCACGCCTGTGCCATCGGAACCGGTAGGCGACGCCAGCGAAGTTTATGGATTTGATAACGATGCCGACGAGAGCGACAAACGAAACGATCGGGAGGAGGCCGGCGACGGAACTTCGTCGTACGGATACAAAAGGCCCAAGCTTTCAAACGGCGGGGAGTATAGGAAGGACAGGGAGGAGTGGAGCGACGCGGCGATCGTTTGCCTTCTGGAGGCTTATACAGAGAAGTTCACTCAGCTGAATCGAGGGAACCTTAGAGGGAGGGATTGGGAGGAAGTGGCGGCAATTGTGAGTGAGCGGTGTGAAAATCAAACAAAGAGCGTGGAGCAATGCAAGAATAAAGTTGATAACTTGAAGAAGAGGTACAAGTTGGAAAGGCATAGGATGAGCAATGGCTGCATTTCAGCCAGTCACTGGCCTTGGTTCAAGCAGATGGAACAGATCGTTGGCAATTCGCTATCTACAAAGTATGTGCAGGATGAAGACAAGGGGATCGGTTCTGGTGGGAATTCGCCGAGACTACCAAAGAGATATGGAGTCACAATATCCAGCAGTGGAGGTCAACTGAATAGCCTGAAGTCAAAACCAATGTCAAACGTTAGATGGCGAAGGGTAGTCTTCAAAATTAGTGGAGCAGCTCTTACTGGATCTGCTACCTGCAGTATTGACCCAAAGGTGGCCATGTTAATTTCAAAAGAAGTTGCCATAGCCTCTCGCAATGGTGTGGAGGTTGCAATTGTTGTTGGAGGTCGTAACTTTTTCTGTGGAGATGCATGGGTAACTGCAACTGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCCACTGTGATGAATTCTATATTGCTCCAATCAACGCTAGAGAAGATGGGTGTTCAAACTCGTGTGCAAACTACCATTGCTATGCACGAGTTTGCTGAAACATACAATAGGCAGCGGGCCATTAGACATCTTGAGAAAGGAAGAGTTGTTATATTTGGTGGCATTGGTTTTGGGACCGGAAATCCACTCTTCTCAACTGATATAGCTGCAGCTCTTCGAGCTTCTGAGATTAATGCTGAGGCTGTTCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGGGATGGCAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTTTCAAGAGGTGCCACCTCCATGGATATGACGGCACTGACTTTCTGTGAGGAAAATGCTCTTCCTGTTGTGGTTTTTAATCTCCTGGAGCCTGGGAACATCTCAAAAGCTTTGTGTGGAGAACAAGTTGGTACACTAATTGACCAAACCGGATCCATAAGCTGA 1443 0.4837 MASCDDDDFSLLSDDHHQSSSGPHHHLHQTYAPHSFSSAVTPVPSEPVGDASEVYGFDNDADESDKRNDREEAGDGTSSYGYKRPKLSNGGEYRKDREEWSDAAIVCLLEAYTEKFTQLNRGNLRGRDWEEVAAIVSERCENQTKSVEQCKNKVDNLKKRYKLERHRMSNGCISASHWPWFKQMEQIVGNSLSTKYVQDEDKGIGSGGNSPRLPKRYGVTISSSGGQLNSLKSKPMSNVRWRRVVFKISGAALTGSATCSIDPKVAMLISKEVAIASRNGVEVAIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTTIAMHEFAETYNRQRAIRHLEKGRVVIFGGIGFGTGNPLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDGNFTFEHISFRELVSRGATSMDMTALTFCEENALPVVVFNLLEPGNISKALCGEQVGTLIDQTGSIS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2900 480 Pfam Amino acid kinase family 243 453 IPR001048 -
Prci1g2900 480 Coils Coil 140 167 - -
Prci1g2900 480 CDD AAK_UMPK-PyrH-Ec 242 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
Prci1g2900 480 FunFam Uridylate kinase isoform A 233 479 - -
Prci1g2900 480 SUPERFAMILY Carbamate kinase-like 240 473 IPR036393 -
Prci1g2900 480 MobiDBLite consensus disorder prediction 1 95 - -
Prci1g2900 480 MobiDBLite consensus disorder prediction 59 77 - -
Prci1g2900 480 FunFam Aspartate/glutamate/uridylate kinase family protein 100 163 - -
Prci1g2900 480 Gene3D - 100 163 - -
Prci1g2900 480 Pfam Myb/SANT-like DNA-binding domain 97 187 IPR044822 -
Prci1g2900 480 Gene3D - 236 474 IPR036393 -
Prci1g2900 480 PANTHER URIDYLATE KINASE 93 479 - -
Prci1g2900 480 Hamap Uridylate kinase [pyrH]. 239 474 IPR015963 GO:0005737|GO:0006221|GO:0033862
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2900 Prci-Chr1 47682437 47687605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2900 71 191 Trihelix Transcription Factor Family AT3G14180 39.024 6.70e-18 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g2900 AA_kinase 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2900 - - gmx:100805459 726.857