Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2897 ATGGAAACCAATGGACTAGGTGCTGGAATGTTCTCTAGCATCAGTTCTGGGTTGCTTGTAGCAGAGGACCCCTTACAGCAGCAGCAGCCGCAAAACTTGTCTAATCCTCAAAATCCTCGTCCTATGCATCATTCTCAAATGGTTTCTTATGCTTCTTCCCACCATGAAACTGATATTCCTCAAGCACCGTCCCAACAATCGATCAAGCATGGGCACCCCTATTCGGCTAAGATGAATCAACAAATGCCTCTCAGTGACGATGATGAAGCCGTGTTCGCGGCAGAGGACAACGTCAGCTCCGGTGATAAGAGGAAAGTATCGCAGTGGCACAGAATGAAGTGGACGGACACTATGGTCAGGCTCTTGATAATCTCGGTTTATTACATTGGCGACGAAGGTGGTTTGGAAGGGGCTGATAAGAAGAAGCCTGCGGGTCTGTTGCAGAAGAAGGGGAAATGGAAATCGGTGTCGAGGGCTATGATGGATAAGGGGTTCTTCGTGTCTCCTCAACAATGTGAGGACAAGTTCAATGATTTAAATAAGAGGTACAAGAGGGTGAACGATATTCTGGGTAAAGGAACGGCTTGCCTGGTTGTGGAAAATCACAACTTGTTGGAGACCATGGACTTGTCAACGAAAAGGAAAGAAGAAGTTCGAAAATTGCTCAATTCTAAGCATCTTTTCTTCAGGGAAATGTGTGCTTACCACAATAGTTGTGGCCATGGCGGCACTGGTGGGCCGCAACAACAATCCCCAGAGATGGGAGCAGAACCATCTCAAGCGGCACAACCGCAACAACACCAGCGGTGCTCCCACTCATCGGAAGTTGGGATGGCGAGTTTGGGAAAGCCAGAATCAGAAGGACTCAAGATTTCGAAAGAGGTGAGCAGGGAAGAGGATGAAGATGACGACGACGATGACGATTCAGAGGATTCCTCTGATGAAGACGAAGAGTCAGGAGAAGGCGTTTCAAGGGGCAATAAAACTGGGAATGCACATGAAGACGAGGATGAGACTTATGAAGGAAGACCACCGACGAAGAGATCAAGAAAAGAAGATTCTTGGGCTTCGTCTACGTTAATGCGGGAAACGAGCAATGAAGTGATGGGCGTGTTGCAAGATGGAGGGAGAAGCGCGTGGGAGAAAAGGCAATGGATGAAAAGGAAAGTGATGCAATTGGAGGAACAGCAACTGAGGTACGAGGTAGAAGCTTTTGAGCTGGAGAAGCAGAGGCTGAAATGGGCGAGGTTTAGCAGCAAGAAAGAGAGGGAAATGGAGAGAGCCAAGCTGGAGAACCAAAGGAGGCAGCTGGAGAATGAGAGGATGGTTTTACTATTACGCCAGAAGGAGCTTGAGCTATTGAGTCAATCTTCACCATCACCTACCACAGCAGCAGCAACATTCTTCTAG 1410 0.4809 METNGLGAGMFSSISSGLLVAEDPLQQQQPQNLSNPQNPRPMHHSQMVSYASSHHETDIPQAPSQQSIKHGHPYSAKMNQQMPLSDDDEAVFAAEDNVSSGDKRKVSQWHRMKWTDTMVRLLIISVYYIGDEGGLEGADKKKPAGLLQKKGKWKSVSRAMMDKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENHNLLETMDLSTKRKEEVRKLLNSKHLFFREMCAYHNSCGHGGTGGPQQQSPEMGAEPSQAAQPQQHQRCSHSSEVGMASLGKPESEGLKISKEVSREEDEDDDDDDDSEDSSDEDEESGEGVSRGNKTGNAHEDEDETYEGRPPTKRSRKEDSWASSTLMRETSNEVMGVLQDGGRSAWEKRQWMKRKVMQLEEQQLRYEVEAFELEKQRLKWARFSSKKEREMERAKLENQRRQLENERMVLLLRQKELELLSQSSPSPTTAAATFF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2897 469 Gene3D - 114 185 - -
Prci1g2897 469 Coils Coil 418 447 - -
Prci1g2897 469 MobiDBLite consensus disorder prediction 22 71 - -
Prci1g2897 469 Pfam Myb/SANT-like DNA-binding domain 111 234 IPR044822 -
Prci1g2897 469 MobiDBLite consensus disorder prediction 241 370 - -
Prci1g2897 469 MobiDBLite consensus disorder prediction 319 357 - -
Prci1g2897 469 PANTHER F16F4.11 PROTEIN-RELATED 1 456 - -
Prci1g2897 469 MobiDBLite consensus disorder prediction 298 318 - -
Prci1g2897 469 Coils Coil 390 410 - -
Prci1g2897 469 MobiDBLite consensus disorder prediction 242 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2897 Prci-Chr1 47669857 47671699 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1g2897 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2897 - - qsa:O6P43_009501 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2897 1 47669857 47671699 Prci1g2897 1 47669857 47671699 ECH