Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2877 ATGTCGGTGCCTCCCTGGCTCGAGCCCCTGCTCACCACTTCCTTCTTCAGCGTCTGTCGCTTCCACGGCGACGCCGCCAGGAGCGAGTGTAACATGTTCTGCCTCGACTGCAATCGCGACGCATTTTGCTTTTATTGTCGGTCATCCAGGCACAAGGATCATCAGGTCATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGAGTGTCCGAGATTCAGAAGGTATTGGACATAGGCGGGGTTCAGACGTACGTGATAAACAGCGCGAGAGTCCTGTTTCTGAACGAGAGGCCTCAGCCAAAATCTGGGAAGGGAGTGGCTCACATTTGTGAGGTTTGCGGAAGAAGCCTCTTGGACCCATTCCGCTTCTGTTCTCTGGGCTGTAAGCTTGTGGGAGTGAAGAGGAATGGGGATGCAAACTTTGCTTTGGAAGGAAACAACGAGGCGATGGCGAGGGGGGAGGGAATATCAAGGAGATCAGTATCGGAAGAAGAATCGCGTGAAGGCTCACAACAAGACATGTATCCGGCCACGCCTCCTCCACCTGCTTCAACCGCAAGGAGAAGAAAAGGGTCCACAGGCAAGAGTTCTCCTGCACTATGGACCTAA 612 0.5327 MSVPPWLEPLLTTSFFSVCRFHGDAARSECNMFCLDCNRDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDIGGVQTYVINSARVLFLNERPQPKSGKGVAHICEVCGRSLLDPFRFCSLGCKLVGVKRNGDANFALEGNNEAMARGEGISRRSVSEEESREGSQQDMYPATPPPPASTARRRKGSTGKSSPALWT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2877 203 Pfam PLATZ transcription factor 60 131 IPR006734 -
Prci1g2877 203 SUPERFAMILY B-box zinc-binding domain 17 61 - -
Prci1g2877 203 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 193 - -
Prci1g2877 203 MobiDBLite consensus disorder prediction 153 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2877 Prci-Chr1 47492523 47497146 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Prci1g2877 PLATZ 2.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2877 - - gmx:100809455 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2877 1 47492523 47497146 Prci3g2942 3 41043790 41045953 CCT
Prci1g2877 1 47492523 47497146 Prci1g2877 1 47492523 47497146 ECH