Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2874 ATGTCTGCGAAAGAGTCATCGGAGTCCCGGAACCAAGCAAGGCTGGCCATCCTGGAACTGGCCAACATGATCAGTGTGCCCATGTCCCTCAATGCCATCGTCCGCCTCAACGTTCCCGACGCCATCTGGCAGTCCGGCTCCAACACTCCCCTCGCCGCCTCTGAGATTCTCATGCGTGTCCTCCCTTCCGGCGGCGACGCCGAAAACCTCCAACGCATCCTTCGCATGCTCACCAGTTATGGGGTCTTCGCCGAGCACATCGACTCCGGCGGCGAGAGAAAATACTCCCTGACCGACGTCGGCAAAACCCTCGTCACCGATGAAGAAGGCCTGTCCTATGCGGCTTACGTGCTCCAGCACCACCAGGACGCGCTGATGCGGGCGTGGCCGTTGGTGCATGAGGCGGTGAAGGACTCGACGGAGGAGCCGTTCGTGAAGGCTAACGGACAGGCGGCGTACGATTACTATGTGAAAGAGCCGGAGATGAACGGATTGATGGTGAAGGCGATGTCCGGGGTATCGGTACCGTTCATGAAGGCGGTGCTGGAGGGATACGATGGGTTCTTAGGGGTGGAGAGACTGGTAGACGTGGGTGGGAGTGGAGGGGATTGCCTGAGGATGATCCTACAGAAACATCGAAGCGTGCGAGAAGGGATTAACTTCGATCTGCCGGAAGTGGTAGCCAAAGCGGCCGTCATTCCAGGGGTAACCCACGTTGGTGGTGACATGTTCAAGTCTATTCCCCAAGGCGATGCCATCTTCATGAAGTGGATACTAACAACTTGGACGGACGAGGAGTGCAAGAAGATACTGGAGAACTGTTACAAGGCGCTGCCGGAGGGAGGAAAATTGATAGCTTGCGAACCGGTGCTGCCGGAGGAATCCGACGACAGCCGCAGAACTCGAGCGTTGCTAGAGGGCGACATTTTTGTGATGACAATCTACAGAGCCAAAGGTAAGCATCGGACTGAAGATCAGTTCAAGCAGCTTGGCCTTTCTGCTGGTTTCCCTCGTTTCCGTGCCCTCCATTTTGACTACTTCTATGCCCTCCTTGAATTCCAAAAGTGA 1068 0.5618 MSAKESSESRNQARLAILELANMISVPMSLNAIVRLNVPDAIWQSGSNTPLAASEILMRVLPSGGDAENLQRILRMLTSYGVFAEHIDSGGERKYSLTDVGKTLVTDEEGLSYAAYVLQHHQDALMRAWPLVHEAVKDSTEEPFVKANGQAAYDYYVKEPEMNGLMVKAMSGVSVPFMKAVLEGYDGFLGVERLVDVGGSGGDCLRMILQKHRSVREGINFDLPEVVAKAAVIPGVTHVGGDMFKSIPQGDAIFMKWILTTWTDEECKKILENCYKALPEGGKLIACEPVLPEESDDSRRTRALLEGDIFVMTIYRAKGKHRTEDQFKQLGLSAGFPRFRALHFDYFYALLEFQK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2874 355 CDD AdoMet_MTases 193 287 - -
Prci1g2874 355 Gene3D - 1 109 IPR036388 -
Prci1g2874 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 355 IPR016461 GO:0008168
Prci1g2874 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Prci1g2874 355 SUPERFAMILY "Winged helix" DNA-binding domain 8 107 IPR036390 -
Prci1g2874 355 FunFam Caffeic acid 3-O-methyltransferase 110 355 - -
Prci1g2874 355 PANTHER O-METHYLTRANSFERASE 20 345 IPR016461 GO:0008168
Prci1g2874 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
Prci1g2874 355 Gene3D Vaccinia Virus protein VP39 110 355 IPR029063 -
Prci1g2874 355 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Prci1g2874 355 Pfam O-methyltransferase domain 132 336 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2874 Prci-Chr1 47451037 47455673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2874 4 355 Monolignol Biosynthesis Gene Families AT3G53140 76.751 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2874 - - gmx:100784957 585.489