Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2842 ATGAAGCCATCGACCGTCGAGAGCGTCTTCGCCGACTTGCCCTGGAGACCATTGATCTTGCTAAAGACCCATATTTCATGCGCAACCATCTTGGGAGCTATGAGTGCAAGCTTTGTCTCACCTTACACAATAACGAGGGCAATTACTTGGCCCACACTCAGGGTAAGCGGCATCAGACTAATCTGGCAAAGAGAGCAGCTCGTGAGGCCAAAGAGGCACCTGCTCAGCCTCAGCCCCACAAACGTAAAGTCTCGGTTCGCAAGTCAGAATTCAACATGTTTGCACTTTGCAGTCAAGATTGGTCGGCCTGGGTACCGAGTGACTAAGCAATTTGATCCAGAGACAAAGCAGAGATCTCTTCTTTTCCAGATAGAATATCCTGAGATTGAAGAACTCACAAAGCCAAGGCATAGATTTATGTCTTCATATGAGCAGAGGGTTCAACCATTTGACAAAAGATATCAGTATCTTTTGTTTGCAGCTGAACCGTATGAGATAATTGCTTTCAAGGTTCCCAGCACAGAGATTGACAAGTCCACACCAAAGTTTTTCTCACATTGGGACCCAGACTCAAAAATGTTCACGTTGCAGTTATATTTCAAACCCAAGCCACCAGAGGCTAACAAACCACAGCCTCCCTCTACAACCAATGGCACTGCAGCACCTGGGGCCCCACCAAGGCCTGTGCCTCCACCACCTCAAGCTCCACCGCCACCACCACCTCCACCACAAGGACTACCTCCTGGTGCTGCTGTCGGAAATCCTCCTAGAGCCCCTCCACCTCCAATGCCTGGATCATTGCTGCTGCCGCCGCCTCCTCCAATGTCAAATGGCCCTGCACCTGCACCTCCTGGCGGAATGCCACCGCAACCCCTAGTTGCAGCTGGCCCAGCAGCTAGTTTCAGCATGGGTTCTAGGCCCCCTTCAATGCCACCTCCTCAAAATTATTTAGCCCAACGTCCACCCCCACCACCTCCAAGCATGGGATAG 990 0.5121 MKPSTVESVFADLPWRPLILLKTHISCATILGAMSASFVSPYTITRAITWPTLRVSGIRLIWQREQLVRPKRHLLSLSPTNVKSRFASQNSTCLHFAVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEELTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPSTTNGTAAPGAPPRPVPPPPQAPPPPPPPPQGLPPGAAVGNPPRAPPPPMPGSLLLPPPPPMSNGPAPAPPGGMPPQPLVAAGPAASFSMGSRPPSMPPPQNYLAQRPPPPPPSMG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2842 329 PANTHER SPLICING FACTOR 3A SUBUNIT 2 95 314 - -
Prci1g2842 329 MobiDBLite consensus disorder prediction 306 329 - -
Prci1g2842 329 MobiDBLite consensus disorder prediction 202 329 - -
Prci1g2842 329 FunFam Splicing factor 3a subunit 2 85 208 - -
Prci1g2842 329 Gene3D - 82 208 - -
Prci1g2842 329 SMART CactinC_cactus_3 88 207 - -
Prci1g2842 329 MobiDBLite consensus disorder prediction 223 291 - -
Prci1g2842 329 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 100 194 IPR031781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2842 Prci-Chr1 47204415 47208883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2842 98 218 C2H2 Transcription Factor Family AT2G32600 84.298 1.03e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2842 K12826 - mof:131167275 240.35