Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2812 ATGATTCGGTCTTTGATTGAGAGAATATTACATAAGAGTCTGTCGCTCCTTGTGGGCAGAAGATCTGCAACCCGCCAGTCGGATGAGGATGAAGAAGTGGCAGCGGGAAATAATAAGGCAGTGCCTGCCGATGTAATGGACGGCCAATTTGCAGTTCTTGCAATCGAAGGTAAAGAAGCGAAAAGGTTTATCCTTGAACTAGACTACTTGGCTGACCCGGAATTCTTGGAGCTGCTAGACCGGGCTCGGGAAGAGTACGGTTTTGGACAGCAAGGAGCTCTTTCAGTGCCTTGCCGCCCTCAAGAATTAGAGAAGATCCAGGAGAGTCGCAGCAGGAGAAACTCGCTGTCAACATAG 357 0.493 MIRSLIERILHKSLSLLVGRRSATRQSDEDEEVAAGNNKAVPADVMDGQFAVLAIEGKEAKRFILELDYLADPEFLELLDRAREEYGFGQQGALSVPCRPQELEKIQESRSRRNSLST 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2812 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 105 IPR003676 GO:0009733
Prci1g2812 118 Pfam Auxin responsive protein 27 106 IPR003676 GO:0009733
Prci1g2812 118 MobiDBLite consensus disorder prediction 99 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2812 Prci-Chr1 46931386 46932560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2812 25 98 Calmodulin-binding Proteins AT3G43120 40.541 2.08e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2812 - K14488 pcin:129297618 228.794