Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2798 ATGAAGTGTTTACCTTTCCACTATGGAGAGAAGAAGGAAGAACCGATGAGCATGAAGTCAGCTTCGGGTCGGTCCAACAGTTCCACAAATGCTGAAGATGATATGAGAAGATCTGGTTCTGAATTGAATTCTAAGGATCCTTTAGAAAACAGTACAGAGTCCCTTGGGAGGACTGCATTACCCAGTTTGTCTCAAAGACCCAGCAACCTGAAAGTCTTCACTGTTCCTGAACTAAAATCAGCCACGAAGAATTTCAGTCGCACTGCTATGCTTGGAGAGGGAGGGTTTGGATGTGTATACAAGGGATTGATCAAGAGTGGAGAGGATCCTAACAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAGTGCAGGGGCATAAGGAATGGGTGACAGAAGTTAATGTTCTGGGCATTGTTGAGCATCCCAATCTGGTAAAACTAGTGGGTTACTGTGCAGATGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAACACCACTTATCACCCCGTTCAGAGAATCCTCTCTCATGGAGTAGAAGATTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATCTTCAGAGACTTCAAATCTTCAAACATCCTCCTGGATGAGCATTGGAATGCAAAGCTATCAGACTTTGGGTTAGCTAGATTGGGACCACCTGAAGGATTAACTCATGTCTCGACAGCGGTTGTGGGAACAATGGGATACGCGGCTCCTGAATATGTTCAAACTGGCCGTCTGACATCTAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATCACTGGCCGGCGCCCTTTTGATCGAAATCGTCCGAAGAGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACTTGTCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAACACGTTTTTAAGTCAGCTCAAAGACTTGCTATTGTAGCTAACCGATGCTTAGTCAAAAACCCAAAGAGTCGCCCTAAGATGAGTGAGGTATTGGATATGGTGAATCAGATTGCACAATCTTCATTGAGTGCAAGTCCAGAGCTACCCTTGAAGAATTTTGCATCAACGCAAGAGTCGCAAGAAACGAAATTAAAGAACAAGAGAAGGACTATGGACCTTAAACCTGGAGAAACTAATTGTTTTTTTAGGATATGGAGACGAAAGCAGCAAGGAGCCATTTGA 1278 0.4335 MKCLPFHYGEKKEEPMSMKSASGRSNSSTNAEDDMRRSGSELNSKDPLENSTESLGRTALPSLSQRPSNLKVFTVPELKSATKNFSRTAMLGEGGFGCVYKGLIKSGEDPNRKIEVAVKQLGKRGVQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSENPLSWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPPEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKSEQKLLEWVRPYLSDGKKFQLILDPRLERKHVFKSAQRLAIVANRCLVKNPKSRPKMSEVLDMVNQIAQSSLSASPELPLKNFASTQESQETKLKNKRRTMDLKPGETNCFFRIWRRKQQGAI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2798 425 MobiDBLite consensus disorder prediction 44 62 - -
Prci1g2798 425 MobiDBLite consensus disorder prediction 1 18 - -
Prci1g2798 425 PANTHER OS01G0588500 PROTEIN-RELATED 35 370 - -
Prci1g2798 425 Gene3D Phosphorylase Kinase; domain 1 60 170 - -
Prci1g2798 425 Pfam Protein kinase domain 87 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2798 425 FunFam Serine/threonine-protein kinase PCRK2 171 379 - -
Prci1g2798 425 FunFam Serine/threonine-protein kinase BIK1 52 170 - -
Prci1g2798 425 CDD STKc_IRAK 91 369 - -
Prci1g2798 425 MobiDBLite consensus disorder prediction 1 62 - -
Prci1g2798 425 SUPERFAMILY Protein kinase-like (PK-like) 62 366 IPR011009 -
Prci1g2798 425 Gene3D Transferase(Phosphotransferase) domain 1 171 385 - -
Prci1g2798 425 ProSiteProfiles Protein kinase domain profile. 85 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2798 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2798 Prci-Chr1 46887299 46891218 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2798 1 363 Glycoside Hydrolase AT3G07070 43.316 3.73e-92 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci1g2798 Pkinase 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2798 - - qsa:O6P43_010275 681.789