Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2795 ATGGATCCTGAAGAATACTTACAGAAGTGTTCCAATATGAAATGCCAAAGGGTTCAAGTAGATGGATCATTGGTTCCTGCTATTCAAGACGAATCGATGGAAGTTGAACATTTGCTTGCAGAACCTAGAAACGATCATGTTTCAGTGGATGGTATTTTGTATTTTCATGAGGAGAGTGTAGGCAGATGTGCTGTCGAAAATCTTTCCCATGGATTTGAATTTGGTCTAAGAACAAGCATAGGTGGATCGGATTCTCATACAACTTTGAATGGAAAACATGATTTGAAACTTGAGGTACTTGATGGATTGCTGGATGATGTTGAAATTGATGGTCTTAATGCGACAGATGGGTTTTCATGTGAAGATTATCTTTTGGATTTTGAATATCCTGACCAAGCTGTGGGTCTTTGTGGAGAATTACTACTACAAAGTTCAAGCTCTGAGAGCCATTCTCCAGGATTAAGTGGAAGTAGCAACGGTGTTGGTGGAGTATCTGAATCATCGAAAGTGGCCATTGAACAAATAGAATACAAAAATAATTTTCTAGATGATAGAGTTGCCCATGACTTGCATGGTGCCTTCAGGAACAATTCCTATCAAACATCCATTGAAGATGGAACTTGCAATTCACTTGATATGCAGCATCTAAATGAGTTGGATAATGATACCCCTTTAGCAGATAGTATATTGTCTTGCAAGAAGAAAAAGGGTTCTGTGGACGAATGTCAAATTACTGCAGTTAGAGAGAAGAGATGCCGTAAGCCTACTCTGAGGTTTAGAGCATTGAGACACATTCCATGCAAGAATTCTGGAAGTCAAACAAGTGATATGGCGCTTCCTGAGTTGCAGGATCACAAGCAATGTCTGAAAAGTGAGGAGCTTGAGTATGAAGAGTCTGCATCGGAGTCTGAGGATGAATGCGTGACGCCAAAAAGATATAATAAAAATGATCGGAGGAAGCATCAAAGAATGTGGACTTTATCTGAAGTGATCAAGTTGGTTGATGGTATTTCTGAACATGGAGTTGGGCGATGGACTGATATAAAGCGTCTTCTGTTTTCTTCCTCCAGTTACCGTACACCGATAGATCTCAGGGACAAGTGGCGGAATCTTTTAAGAGCCAGTTCAGCACAGAAATTTAACAACAAAGAGACTGAACAAAAGCAGCAGCATGCCTTGCGTTCGTTGCCAAGTACTGTACTTCGCCGAGTTCGTGAACTGGCTAAAATTCATCCATACCCGAGGGAGCGTTACTCAAAGGAATCATCTGCTGGCCAAGTTGGTTCCTCTGCCCTTCCAATTCAAACTAAATGTGGTCCTAGCAAAAGAAATGTACGTAGGAAGAAGTGTATTTGA 1356 0.4086 MDPEEYLQKCSNMKCQRVQVDGSLVPAIQDESMEVEHLLAEPRNDHVSVDGILYFHEESVGRCAVENLSHGFEFGLRTSIGGSDSHTTLNGKHDLKLEVLDGLLDDVEIDGLNATDGFSCEDYLLDFEYPDQAVGLCGELLLQSSSSESHSPGLSGSSNGVGGVSESSKVAIEQIEYKNNFLDDRVAHDLHGAFRNNSYQTSIEDGTCNSLDMQHLNELDNDTPLADSILSCKKKKGSVDECQITAVREKRCRKPTLRFRALRHIPCKNSGSQTSDMALPELQDHKQCLKSEELEYEESASESEDECVTPKRYNKNDRRKHQRMWTLSEVIKLVDGISEHGVGRWTDIKRLLFSSSSYRTPIDLRDKWRNLLRASSAQKFNNKETEQKQQHALRSLPSTVLRRVRELAKIHPYPRERYSKESSAGQVGSSALPIQTKCGPSKRNVRRKKCI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2795 451 Pfam Myb-like DNA-binding domain 325 372 IPR001005 -
Prci1g2795 451 Gene3D - 311 423 - -
Prci1g2795 451 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 317 376 IPR017930 -
Prci1g2795 451 SMART sant 321 374 IPR001005 -
Prci1g2795 451 CDD SANT_TRF 323 373 - -
Prci1g2795 451 MobiDBLite consensus disorder prediction 417 451 - -
Prci1g2795 451 MobiDBLite consensus disorder prediction 422 437 - -
Prci1g2795 451 SUPERFAMILY Homeodomain-like 319 403 IPR009057 -
Prci1g2795 451 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 258 - -
Prci1g2795 451 ProSiteProfiles Myb-like domain profile. 317 372 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2795 Prci-Chr1 46875201 46880225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2795 325 383 Single Myb Histone (SMH) Gene Family AT1G72740 40.984 8.22e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci1g2795 Myb_DNA-binding 4.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2795 - - aprc:113871152 426.787