Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2793 ATGAAGAGAGAGTTTCTGAGAGTGTGCCTTAACAAGTGGAAGAAAATGAAGAGTCGAGTCATACCTTGTTGTGCCTGTGAGTGTTGCTGTAAATGGGCTTTATGGTCGTCCGTGCATGAAAGAAGATCAATCCCTAGTGATGTCCCAAAGGGGCACCTTGTTGTCTATGTAGGGGAGAATTTCAAGAGATTTGTAATTAAGGTCACGTTACTCAGCCACCCACTCTTCAAAGCATTGCTGGATCAAGCTCGGGAAGAGTACGATTTTGTTTCATATTCAAAACTTTGCATTCCCTGCGACGAGCATCTTTTCCTCAGTGTCCTTCGCTGTGCTAGCTCTCCGAAGAACAAAGAAGCGTGTCTTTGTTTTTGA 372 0.4409 MKREFLRVCLNKWKKMKSRVIPCCACECCCKWALWSSVHERRSIPSDVPKGHLVVYVGENFKRFVIKVTLLSHPLFKALLDQAREEYDFVSYSKLCIPCDEHLFLSVLRCASSPKNKEACLCF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2793 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 106 IPR003676 GO:0009733
Prci1g2793 123 Pfam Auxin responsive protein 13 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2793 Prci-Chr1 46869496 46870095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2793 31 113 Calmodulin-binding Proteins AT4G34750 43.182 1.57e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2793 K14488 - vvi:100253355 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2793 1 46869496 46870095 Prci1g2793 1 46869496 46870095 ECH