Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2782 ATGGAGTCCATCGCCAAGGCTAACGTTCACCATCAGAATGGCTCCTTCTGCTTGGCTAATGGCACCGCTGATCCGCTCAACTGGGGCGTCGCCGCCGAGTCCCTCAAGGGAAGCCACTTGGACGAGGTGAAGCGTATGGTGGCCGAGTACCGGAAGCCGGTGGTCAGGCTTGGCGGCGAGACTCTCACCATCTCTCAGGTGGCTGCCATTGCCGCGCATGACCAGGGCGTGAAGGTGGAGCTGTCGGAGTCGGCCAGGGCCGGCGTTAAGGCCAGCAGCGATTGGGTCATGGACAGCATGAACAAGGGAACCGATAGCTATGGTGTAACCACCGGATTCGGGGCCACCTCTCACAGGAGAACAAAGCAAGGCGCTGCTCTCCAGAAAGAGCTCATCAGGTTTTTGAATGCCGGAATATTCGGCAATGGCACAGAATCTTGCCAGACTCTGCCACACTCGGCCACGAGAGCAGCCATGCTAGTCAGAATTAACACTCTTCTCCAAGGATACTCTGGCATCCGATTCGAAATCCTAGAAGCCATCACCAAGTTCCTCAACCACAACATCACCCCATGCTTGCCACTTCGCGGTACCATCACAGCGTCCGGCGATCTCGTCCCTCTTTCTTACATCGCCGGTTTACTCACCGGCAGACCTAACTCCAAAGCTGTCGGACCCAACGGAGAAGCCCTTAATCCCAAGGAAGCGTTTCAATTGGCAGGCATCGAGTCCGAGTTCTTCGAATTGCAGCCTAAGGAAGGGCTTGCTCTTGTAAACGGTACCGCCGTTGGTTCTGGCTTGGCTTCCATGGTTCTCTTTGAGGCTAACGTTCTGGCCGTGCTCGCTGAAGTTCTTTCGGCTATTTTCGCCGAGGTCATGCAAGGGAAGCCTGAATTTACAGACCATTTGACCCATAAATTGAAGCACCACCCTGGCCAGATTGAGGCTGCTGCTATCATGGAGCACATTTTGGACGGAAGCTCCTACGTTAAAGCAGCCAAGAAGTTGCACGAGATGGATCCCCTGCAGAAGCCTAAACAAGATCGCTATGCCCTTCGAACTTCACCCCAGTGGCTCGGCCCTCTCGTTGAAGTTATCAGATTCTCCACCAAGTCAATCGAGAGAGAGATCAACTCTGTGAACGACAACCCCTTGATTGACGTTTCTAGGAACAAGGCTCTGCATGGTGGAAACTTCCAGGGCACCCCAATCGGAGTCTCCATGGACAACACACGTCTGGCTATTGCTTCCATCGGTAAACTCATGTTTGCTCAATTCTCTGAGCTCGTCAATGACTTCTACAACAACGGTCTGCCTTCCAACCTCACCGCCAGCAGAAACCCCAGCTTGGATTATGGTTTCAAGGGGGCTGAAATCGCCATGGCTTCTTACTGCTCTGAACTTCAATATCTCGCCAATCCTGTAACAAGCCACGTCCAGAGTGCAGAGCAACACAACCAGGATGTGAACTCTCTGGGTTTGATCTCGTCTAGGAAAACAAACGAAGCCATTGAGATCTTAAAGCTCATGTCTTCCACGTTTTTGGTTGCACTCTGCCAAGCAATTGACTTGAGGCACCTGGAGGAGAACTTAAAGAACACAGTGAAGAACACCGTCAGCCAAGTTGCCAAGAGAACTCTGACCACGGGTGTGAACGGAGAACTCCATCCTTCAAGATTCTGTGAGAAGGATTTACTGAAGGTTGTAGACAGGGAGCACGTGTTTGCTTACGCTGACGATCCCTGCAGCGCTATTTACCCGTTGATGCAGAAACTCAGGCAAGTTCTCGTGGACCATGCACTGGCAAATGCCGAAGATGAGAAGAATCCAAGCACATCAATCTTCCAAAAGATCGGAACTTTCGAGGAGGAGTTGAAGAGCGTCTTGCCGAAGGAAGTGGAAAGTGCAAGAGTCGCATATGAGACCGGCAATTCTGCAATTCCAAACAGGATCAAGGAATGCAGATCATACCCTCTGTACAAGTTTGTGAGAGAGGAGCTTGGAACTCAGTTGCTAACAGGAGAGAGGGTGATCTCACCGGGCGAGGAGTGTGACAAGGTGTTCACTGCATTATGTCAGGGCAAGGTCATTGACCCTCTTCTGGAATGCCTTGGCGAGTGGAATGGTGCTCCTCTTCCTATCTGTTAA 2148 0.5186 MESIAKANVHHQNGSFCLANGTADPLNWGVAAESLKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDQGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCQTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEALNPKEAFQLAGIESEFFELQPKEGLALVNGTAVGSGLASMVLFEANVLAVLAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREHVFAYADDPCSAIYPLMQKLRQVLVDHALANAEDEKNPSTSIFQKIGTFEEELKSVLPKEVESARVAYETGNSAIPNRIKECRSYPLYKFVREELGTQLLTGERVISPGEECDKVFTALCQGKVIDPLLECLGEWNGAPLPIC 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2782 715 FunFam Phenylalanine ammonia-lyase 528 649 - -
Prci1g2782 715 Gene3D - 528 649 IPR023144 -
Prci1g2782 715 FunFam Phenylalanine ammonia-lyase 17 261 - -
Prci1g2782 715 SUPERFAMILY L-aspartase-like 24 715 IPR008948 GO:0003824
Prci1g2782 715 PANTHER HISTIDINE AMMONIA-LYASE 14 715 IPR001106 -
Prci1g2782 715 CDD PAL-HAL 60 525 IPR001106 -
Prci1g2782 715 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 197 213 IPR022313 GO:0016841
Prci1g2782 715 FunFam Phenylalanine ammonia-lyase 262 569 - -
Prci1g2782 715 NCBIfam phenylalanine ammonia-lyase 24 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Prci1g2782 715 Pfam Aromatic amino acid lyase 62 538 IPR001106 -
Prci1g2782 715 Gene3D Fumarase/aspartase (Central domain) 262 710 - -
Prci1g2782 715 Gene3D - 17 261 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2782 Prci-Chr1 46825856 46829470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2782 24 715 Monolignol Biosynthesis Gene Families AT2G37040 86.705 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2782 K10775 - gmx:100811101 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g2782 1 46825856 46829470 Prci1g2782 1 46825856 46829470 ECH