Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2773 ATGGCGAAAGACCTCGAGGGAGCCCCTCCTCACAAGGACTACCATGACCCGCCTCCCGCTCCTCTCCTCGACGCCGCCGAGCTCGGCAAGTGGTCCTTCTACAGGGCCATCATTGCCGAGTTCGTCGCCACCCTCCTTTTCCTCTACATCACTGTCTTGACCGTTATTGGTTACAAAAGCCAGATCGACACCGCTAATAACGGAGGCCCCTGCGACGGCGTCGGCATTCTCGGCATTGCTTGGGCCTTTGGCGGCATGATTTTCGTCCTTGTCTACTGCACCGCCGGCATTTCTGGGGGTCACATAAACCCGGCCGTGACTTTCGGGTTGTTCCTGGCGAGGAAGGTGTCGTTGATTAGAGCGATTATGTACATGGTGGCTCAGTGCTTGGGAGCCATATGCGGGTGTGGCTTGGTCAAGGCTTTCCAGAAGGCCTACTACAACAGGTATCAAGGTGGAGCCAACATGTTGTCTTCTGGCTACAGGAAAGGCACTGGTTTGGGTGCTGAAATTGTTGGTACCTTCGTCCTTGTCTACACCGTCTTCTCTGCCACTGATCCCAAGAGAAATGCCAGAGACTCTCACGTTCCCGTGTTGGCTCCTCTTCCGATTGGATTTGCGGTCTTCATGGTTCACCTGGCCACCATCCCCATAACCGGCACCGGCATCAACCCGGCCAGGAGCTTCGGGGCCGCAGTCATGTACAACAATCAGACGGCGTGGGATGACCATTGGATCTTCTGGGTCGGACCCTTCGTCGGTGCCGCAATTGCTGCAATTTACCACCAATACGTGTTGAGGGCTCAGGCGGCCAAAGCTCTGGGCTCTTTCAGGAGCCACTCCAACTTGTGA 852 0.561 MAKDLEGAPPHKDYHDPPPAPLLDAAELGKWSFYRAIIAEFVATLLFLYITVLTVIGYKSQIDTANNGGPCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGCGLVKAFQKAYYNRYQGGANMLSSGYRKGTGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVMYNNQTAWDDHWIFWVGPFVGAAIAAIYHQYVLRAQAAKALGSFRSHSNL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2773 283 CDD MIP 35 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 FunFam Probable aquaporin PIP1-2 20 281 - -
Prci1g2773 283 Gene3D Glycerol uptake facilitator protein. 20 283 IPR023271 -
Prci1g2773 283 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 NCBIfam MIP family channel protein 39 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1g2773 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Prci1g2773 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 11 277 IPR034294 -
Prci1g2773 283 SUPERFAMILY Aquaporin-like 28 267 IPR023271 -
Prci1g2773 283 Pfam Major intrinsic protein 28 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2773 Prci-Chr1 46688695 46690390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2773 1 283 Major Intrinsic Protein MIP AT2G37170 80.702 3.27e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2773 K09872 - rcu:8284532 493.812