Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2769 ATGAAGATTCCTCGTTCATTTCTCACTTGTTTCTCTGCAACAGTCGAAGAACCAAGACAGCTCGATGACCCGGAAGGAGGCGGTGATGAAGCATTTCGTGTATTCCATCGCAGCGAATTGAAATTAGCCACCCGCGGTTTTAATTCCTGGGACAAGATTGGAGAAGGAGGATTCGGTTCTGTCTACAAGGGGCAGCTTCGGAACGGCAATGTGGTGGCTGTGAAAGTGCTTTCAGTCGAACTGGAATCTATGCGAGGAGAAATGGAGTTCGCCGCAGAATTGGCCACACTCTCTCGTATCAACCACGAAAATCTAGTTAGTCTTCGAGGGTGTTGCGTGGAAGAAGACCGAAGATATTTGGTCTTCAATTACATGGAAAACAACAGCCTTTCCCGCACTTTTTTAGGCACAGAGGAATGCAGGATGAAATTCAGATGGGAATTGAGGAGCAACATATCTGTTGGGGTGGCTCGTGGCCTTGCCTATCTCCATGAGCAACTAAAACCCCACATTGTCCATAGAGATATCAAACCCAGCAACATCCTTCTCGATCAAAACTTCACGCCAAAGCTATCTGACTTCGGTTTCGCAAAGTTGTTTACGGACGAAAAGTCATACGTCAGTACTAGAGTTGCTGGGACATTGGGCTATATTGCTCCGGAGTATGCCACTACCGGAAAATTGACACGAAAATCAGATGTTTATAGCTTTGGAGTGTTACTCTTACAAATTGTTAGTGGCCAAGCAGCGGTTGATGCTTATCAGGATATGGATCGTTTCCTGGTAGAGAAGGTGTGGGCAGCTTATAAAGCTAACGAGCTAGTAAAAATGGTGGATCCTGTGATTACAAATATGAACTCGGTAGCGGAAGAAGGCATTCGATTCCTAAAAGTGGGGCTGCTTTGCGTGCAAGAAACCGCCAAGCTTCGGCCCAGAATGACAGAGGTCGTTGAAATGTTGACTAGCAGCATCTTTAATGACATGGAAGGTGTTGCTATCTCAAAACCAGGCTTTGTTGCTGATCTCAGAAACATCAAAATAAGGCAGCAAATACCAATACCCGTGAGTCCCGAATCAATTTCAAGTGGAGCAAACCAGGGTATTTGGAGGTCGGCCGTTCTCGCCCGTTAA 1131 0.4607 MKIPRSFLTCFSATVEEPRQLDDPEGGGDEAFRVFHRSELKLATRGFNSWDKIGEGGFGSVYKGQLRNGNVVAVKVLSVELESMRGEMEFAAELATLSRINHENLVSLRGCCVEEDRRYLVFNYMENNSLSRTFLGTEECRMKFRWELRSNISVGVARGLAYLHEQLKPHIVHRDIKPSNILLDQNFTPKLSDFGFAKLFTDEKSYVSTRVAGTLGYIAPEYATTGKLTRKSDVYSFGVLLLQIVSGQAAVDAYQDMDRFLVEKVWAAYKANELVKMVDPVITNMNSVAEEGIRFLKVGLLCVQETAKLRPRMTEVVEMLTSSIFNDMEGVAISKPGFVADLRNIKIRQQIPIPVSPESISSGANQGIWRSAVLAR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2769 376 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Prci1g2769 376 SUPERFAMILY Protein kinase-like (PK-like) 32 320 IPR011009 -
Prci1g2769 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Prci1g2769 376 CDD STKc_IRAK 53 321 - -
Prci1g2769 376 Pfam Protein kinase domain 50 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2769 376 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 125 324 - -
Prci1g2769 376 Gene3D Phosphorylase Kinase; domain 1 25 124 - -
Prci1g2769 376 Gene3D Transferase(Phosphotransferase) domain 1 125 332 - -
Prci1g2769 376 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 349 - -
Prci1g2769 376 SMART serkin_6 47 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2769 376 ProSiteProfiles Protein kinase domain profile. 47 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g2769 376 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 26 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2769 Prci-Chr1 46660487 46662604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2769 34 341 Receptor kinase-like Gene Family AT1G56120 46.774 1.05e-85 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1g2769 Pkinase 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2769 - - gmx:100813945 471.085