Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g2761 ATGGAGAGAGATCCTAACTTCGAACTTCAACTCCCTCCTGGATTTAGATTCCACCCTTCAGACGAGGAGCTCATGGTTCACTACCTCAGAAACAAAGTGACTTCATGTCCTCTCCCTGCTTCATTCATTGCAGACATAGATCTCTATAAGTTCAACCCGTGGGAGCTTCCAAGCAAGGCTTTCTTTGGAGCAGACGAGTGGTTTTTCTTCACTCCGAGGGACAGAAAGTATCCGAATGGGCTGAGGCCGAATAGAGCAGCTGGGTCAGGTTATTGGAAGGCTACAGGGACTGATAAACCCATTCTTACTTCGTGTGGAATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGTCGTCCCCCTAAAGGGTCTAAAACCGATTGGATCATGCATGAGTATAGGCTGCTCGATTCAATGATCTTGAGTTACAAGCAAAGAGGCTCTATGAGACTGGATGATTGGGTTCTGTGCAGAGTTCGTCAAAAAAACTGCAGCCCTAGAAGCACTTGGGAGGAGTCGAATGAACCTAGTTATGAACCTACAAGCTACTTTCAACAGATGAACTATGAGAATCCTGATCCTGATGATGAAACTATCAAAAACTGTGTGGCCAATGAATTTCCCATGTTGCCATATATTCTAGCAACTAAGACGAGTACTCATCCTTCCAACGGACAGGCATCATCAAGCTTAAGCTTTCAGCGTAACGATAATGCTTTTGACCATGAAGACACCTCAAACATCATAGAAGCACAGTTCTCAGAATCTACTGCTGGGAGCTTGAAGAGAAAACTCTGTGAACAAGACCAATTGGAACTTTATGATTCTCCTCCCTTTAAAAAGCTAAGTGAGGATGATCATAAGAGGGACATGCTAGGCATAGACGCAAGCAAAGGCTACTACACTAGTGGTTTCAACAGCTTTGATCATTGGAATGCCATCATACAGCCTCAAGAGCTTAATAACTTGGCCTTTGCAGGATACATTTAA 999 0.4404 MERDPNFELQLPPGFRFHPSDEELMVHYLRNKVTSCPLPASFIADIDLYKFNPWELPSKAFFGADEWFFFTPRDRKYPNGLRPNRAAGSGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILSYKQRGSMRLDDWVLCRVRQKNCSPRSTWEESNEPSYEPTSYFQQMNYENPDPDDETIKNCVANEFPMLPYILATKTSTHPSNGQASSSLSFQRNDNAFDHEDTSNIIEAQFSESTAGSLKRKLCEQDQLELYDSPPFKKLSEDDHKRDMLGIDASKGYYTSGFNSFDHWNAIIQPQELNNLAFAGYI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g2761 332 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Prci1g2761 332 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Prci1g2761 332 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Prci1g2761 332 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Prci1g2761 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 239 - -
Prci1g2761 332 FunFam NAC domain-containing protein 72-like 20 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g2761 Prci-Chr1 46594171 46595821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g2761 10 174 NAC Transcription Factor Family AT1G61110 68.208 9.83e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci1g2761 NAM 3.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g2761 - - gmx:100788799 435.647